Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1185 ATGGATATTGATTCTTTATTTTATCTTGTACTTGAAATAATATATGCTGATTATTTTCTCATAATAAATTTTATTCATGACTACCTTACTTACTCTGTAGGCAATGAGGGCCGTGAATACGTCCTGAGGCGTATTCTCCATAGAGATGTTCGTTATGGAAGTGAAGTTCTGAAAGCACAAGAAGGATTCTTCAATAGCCTCATAAACATTGTTGTAAAGGTGATGGGTGATGTTTTCCCTGAACTGAAACAACATGAAGTGCACATCAGTTTATAA 276 0.3442 MDIDSLFYLVLEIIYADYFLIINFIHDYLTYSVGNEGREYVLRRILHRDVRYGSEVLKAQEGFFNSLINIVVKVMGDVFPELKQHEVHISL* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1185 91 SUPERFAMILY Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) 33 87 IPR018162 GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419
Vvi3g1185 91 PANTHER ALANYL-TRNA SYNTHETASE 33 89 - -
Vvi3g1185 91 Pfam tRNA synthetases class II (A) 33 89 IPR018164 GO:0000166|GO:0004813|GO:0005524|GO:0006419
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1185 Vvi-Chr3 16654192 16654779 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1185 K01872 - vvi:100249161 104.375