Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1169 ATGACTAACGTCATTCCTGAAAAGGTCGAGAAATTATGGGATGAATGGAATCTCCGGGGTTCCATTCTTTTCAGTCTTTTCCTCCAGATATTGCTAATTTTTTGTGCGCCAACGCGAAAGTGGAGAGGAAACACATTTGTGACCCTCATTAACTGGTCAGCCTACTTGCTGGCCGACTGGGTGGCAGCCTTTGCAGCCAAAATGCACCCCTTCGACGTTTATGTTACCTATGCCTTGCTCATTGGTGCCATCTGCCTGGACTCTATAGCTGTCATCAAGCTCATTTTTTCTGACTGGACTATAGTTCTACTCAGATGCCGTAGAACCAAAGAGTTTCTTCTTAAAACACGTAAAAGACTCACCATCTACAGAATAGGCAGCTGGTCCAAAACTTTTGGTGGGAGGTGGTCCAATTCTATGTCACAGCACAGTTTGGTTCGTTACTGCCTGAAGGAGCGGTTCAAATGGATCGACGTAACTGTGGATTGGCTTGGACTTAGGGATATTCTGGATGAGATTCAATACAAAGACCACATAGACGTTCCAGATGATTTAAAAATATTTATTTGCGAAGAGCTGAAGGAAAAGGCCAAGAAAGCAAAGAATTCAAAAACTGCCAGGGAGATATGTTCAGGGCGAGGTGATTGGGTTCTCTCACAGAGCGCTTGTCAGTCCCTGATATGGAGTGTTGATGGTGAATATGATAAGAGTCTTTTACTGTGGCATATAGCTACTGATCTCTGCTTTTATGAAATGCTGTCATCAACACATACAGACCCTGAAGTTGGACATCAGCTATCAAAAGAAGGAAGCTTTGATAATAGACGCAAGTTCAGTAAATTCTTGTCAGACTACATATTATATCTTTTGGTCATGAGGCCTACAATGATGTCTGCAGTGGCAGGTATTGGGCAAATTAGGTTTCGAGACACTTGTGAGGAAGCAAAGAAAAGTTTTTCCCCAGTTCCACAGGACAATCTGAACCAAAGTGTTCTATGCCATGGTCATGGCTGGAGAACTCTACTTCTGATAGAAACTGTTGTTAAGCCCATTGAAGTGAAGGGTGATAGAAGCAAATCAGTGTTGTTTGACGCATGTATTCTTGCAAAGGAACTCAAAAAAATGGACGAAAGGAAGAGGTGGAAGGTAATGAGTGAAGTATGGGTGGAATTGTTGTCTTATGCTGCAAGTCGATGCGGAGCAAATACTCATGTCCAGCAGTTGAGCAAAGGTGGAGAACTTGTTACTTTTGTTTGGTTACTAATGACCCAGTTAGGCTTGGGAGATCAGTTCCGGGTAGAGACTGGCCATGCTAGACCAAAAATGCTTGTGCACAAGTAA 1341 0.4303 MTNVIPEKVEKLWDEWNLRGSILFSLFLQILLIFCAPTRKWRGNTFVTLINWSAYLLADWVAAFAAKMHPFDVYVTYALLIGAICLDSIAVIKLIFSDWTIVLLRCRRTKEFLLKTRKRLTIYRIGSWSKTFGGRWSNSMSQHSLVRYCLKERFKWIDVTVDWLGLRDILDEIQYKDHIDVPDDLKIFICEELKEKAKKAKNSKTAREICSGRGDWVLSQSACQSLIWSVDGEYDKSLLLWHIATDLCFYEMLSSTHTDPEVGHQLSKEGSFDNRRKFSKFLSDYILYLLVMRPTMMSAVAGIGQIRFRDTCEEAKKSFSPVPQDNLNQSVLCHGHGWRTLLLIETVVKPIEVKGDRSKSVLFDACILAKELKKMDERKRWKVMSEVWVELLSYAASRCGANTHVQQLSKGGELVTFVWLLMTQLGLGDQFRVETGHARPKMLVHK* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1169 446 PANTHER OS01G0798800 PROTEIN-RELATED 16 66 - -
Vvi3g1169 446 Pfam Domain of unknown function (DUF4220) 70 148 IPR025315 -
Vvi3g1169 446 Pfam Protein of unknown function, DUF594 374 427 IPR007658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1169 Vvi-Chr3 16194423 16196702 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1169 - - vvi:100255511 694.115