Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1164 ATGTTGATAGCCCAGGGAATGGTTCAAGTGACAAAGAAGAAGCTCAATAGGAATGTTGAAATGGTGCGATTGCCGGATGCCCTAAGACAATATTGGTTATCCAAAGCTCAACAAGCCACATTTCTTGGAATTCATACTGACACAAGATCTAAGTTGTCCCTAGGCACCAGCAGGATCCGTCGTCTTGTTGATCATCTTGACAAAGAAGATGTAAGCTTTGATCATATTCATGGTGATTACAACACAACTTCTACTTCTTTTCCACCTTACTATGAAGATGTGCTTTCTTTTATGTCATTCGATACTCAGAAAGAAAGCGAACCAGGAGAAGACGTGGGAAACTTTCTTCGTCAAAGCATATCCAGTGGTTGCTTCCATGTACTGCTCGTGCTTGATCTTGAAAATGTCTTTAGACCTAAGTTACCTGAGGCAATTGGCAAACTAACTCGACTAAGGTACTTTGGCTTAAGATCTACATTTCTCGAGATACTCCCATCATCTATAAGCAAGTTGCAGAATGTTCAAACACTGGACATGAAGCATACTAGCATCAACAATTTGCCTGATTCAATCTGGAAGCTACAACAATTGCAGCACTTATATTTGAGTGAGAGCTACCAAAGTAAACTTCTGCTTGGACAGGGTACCAATTTTCCTACAATCCTCCAGACATTGTGTGGGCTATTTTTAGATGAGGAGACCCCGGTAAGAGATGGCCTAGACAGGAATCCATCTGTTAAGTCCCAATTCCCATACAGCCTCATCGACCTCACTTTATCAGCTTCAGGACATGTAGAAGATCCAATGCAGTCATTGGATAAGCTTCCCAACCTTAGAAGTCTTAAATTGTTTGCCAAATCTTATTTAGGGAAGAACATGATTTGCTCTTTAAGAGGCTTTCCTCAGTTTCGAGTTCTTAAACTATGGAAGTTAGAGCAACTGGAGGAATGGAATGTAGAGAAATGA 966 0.4079 MLIAQGMVQVTKKKLNRNVEMVRLPDALRQYWLSKAQQATFLGIHTDTRSKLSLGTSRIRRLVDHLDKEDVSFDHIHGDYNTTSTSFPPYYEDVLSFMSFDTQKESEPGEDVGNFLRQSISSGCFHVLLVLDLENVFRPKLPEAIGKLTRLRYFGLRSTFLEILPSSISKLQNVQTLDMKHTSINNLPDSIWKLQQLQHLYLSESYQSKLLLGQGTNFPTILQTLCGLFLDEETPVRDGLDRNPSVKSQFPYSLIDLTLSASGHVEDPMQSLDKLPNLRSLKLFAKSYLGKNMICSLRGFPQFRVLKLWKLEQLEEWNVEK* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1164 321 Gene3D Ribonuclease Inhibitor 98 320 IPR032675 -
Vvi3g1164 321 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 114 204 - -
Vvi3g1164 321 SUPERFAMILY L domain-like 122 311 - -
Vvi3g1164 321 Pfam Leucine rich repeat 150 203 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1164 Vvi-Chr3 16109795 16110979 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1164 - - vvi:104879464 463.381