LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi3g1157	ATGGAGGATTTGCGAGACGCCGAGGAGGAGCACACGGGAGAAAATGAGATTCCCCTCCATTCTCGTTTTCTACAGATTCGAGATGTGTTGCAAGATAAGCGCTTCACGCCATCAACACCGATTAGAACGAAGGATTGTCTGTACAATGCTATCGGCGCATTGGAAGAGTGCGTCATCTTGTCGGCTAAGCGTGAACCACGGAAGAAGGATGACCCCCTCCATGGCTACACTCTGGCGGAGCTCTGGCTTCTTTTCAGAACCAAAAAGCTGTTGCTGAAGATAAAGAAAAAGCTTGTCAATACAAGGGAGGATGTCGTTGAAAGTTCACTTGCTAGCACCAGCGCTATTGCTGCAGCCAGTTCATCCTCCACCTCCTTACCGGTATTTATTCCAAGACCAAAAGACCTTGATTGGGAATATAGGTGGAGAAATACATGTTTTGATGAACAAGAGGATGAGATTATAGATGAGCTTGTGGATGGCAAGAAATGGGGCAAAGGTTTAATTGGAATTGTGGGTATAGGGGGCTCCGGTAAGACAACCCTTGCCCAATTAGTTTTTACTAACCACAAGGTGGTGGATTTCTTCCATTACAGAATCTGGATTTGCTTATCTCAAAAACTGAATGCTAGGGATGGAGATGAAAATCTTAAGGAGATGGTGAGAGAGATGATGAAGCAATGTGCGGATGTGGAAGAAAGCAAGGACAAATATGACAGGCTGCAAGACGTGGATGAAGATGCTCTGTTGGAGAATCTTAAAAGTGTGTTGATGGGGAACAAGTATTTGATGGTATTTGACGGCATATGGGACATTAAGATGGACTGGTATTTGAAGTTGGGTGACAAGTTAGAGTGGTTTGATAATCACAAAGTCAAAGAAAGAGAAAGAGAAAGAGAGAGTAGTGCAGGCGTGATCATCACAACCAGACTCCCCCACATCCCCAAACAGATGGGGATGCCTTTGCATCACATGGCCCCTCCATCCCCAACAACGTTTCTGTACGAACGAAGTCTTAAAGATGCTGGCTTTGCAACGAAAGAGGCTCAGAAAATGGAAGATGACATTATACAGCAGTGTGATGGCCTCCCATTAGCTGCGGAGATATTGTCGAAGATAATTCCAAATCTAATCTTGGGAGACAGTTACAAAATATTACATCAATTTTTTTTGGTGGCAATGGTTAACTCTGAAGACGATGCTATATTAGGAAAGGATTTTTTTTTACAATTGCATGACCTCACAGATGATGATGTTGATAAGGTTGTTGATGTTTCAAAACTTCCTCTTCTTGATATGTTAGAGATACTCAATCAACATACATATTTGACAGAAAGAGTTATGAAGGATAAGTACAAAAAGACACTAAAACTACTAGTCGTGAGTGGGGATGCTAAAGCTAATAGGCTCCTACAACTCATCAACAATTTAAAAATTGATCCAAAACCACCAATTGCCATACTGTCTTTGGGATCTCAAACTAACTTTTCCCTTTCACTAGGATGGAAAAATCATACTCCAACTCATGCAAACATCACCAATGTGTCATTGTTCTTGCAAAAAGTGTATGCTGCAGAAGAAAGGGTTATAGATAGTTGGGATTTTCTAATGAGGATGACGATGATTCCAAACAGCTTGCTACAGGCTTTTTCATATCCTAGTACTTCTGAAGCAGATTTGACCCATATGGGCGGATACAAAGAATTCAGAACAACATTTTGGAGCTACTTTATCATTGGAATGGGTGATCGAGAATGGTTTGCTTCTTCTTCCCATGAAAAAAAGGACGAAGTATTCACTAATTCTTGTTGTAAATCATGGCCAAGGTATGTATTTGATGGCATGATTTCAAATATTTTATGTCTAATAGTGTTTTCTATTTCATAA	1887	0.4086	MEDLRDAEEEHTGENEIPLHSRFLQIRDVLQDKRFTPSTPIRTKDCLYNAIGALEECVILSAKREPRKKDDPLHGYTLAELWLLFRTKKLLLKIKKKLVNTREDVVESSLASTSAIAAASSSSTSLPVFIPRPKDLDWEYRWRNTCFDEQEDEIIDELVDGKKWGKGLIGIVGIGGSGKTTLAQLVFTNHKVVDFFHYRIWICLSQKLNARDGDENLKEMVREMMKQCADVEESKDKYDRLQDVDEDALLENLKSVLMGNKYLMVFDGIWDIKMDWYLKLGDKLEWFDNHKVKERERERESSAGVIITTRLPHIPKQMGMPLHHMAPPSPTTFLYERSLKDAGFATKEAQKMEDDIIQQCDGLPLAAEILSKIIPNLILGDSYKILHQFFLVAMVNSEDDAILGKDFFLQLHDLTDDDVDKVVDVSKLPLLDMLEILNQHTYLTERVMKDKYKKTLKLLVVSGDAKANRLLQLINNLKIDPKPPIAILSLGSQTNFSLSLGWKNHTPTHANITNVSLFLQKVYAAEERVIDSWDFLMRMTMIPNSLLQAFSYPSTSEADLTHMGGYKEFRTTFWSYFIIGMGDREWFASSSHEKKDEVFTNSCCKSWPRYVFDGMISNILCLIVFSIS*	629

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi3g1157	628	Pfam	NB-ARC domain	151	371	IPR002182	GO:0043531
	Vvi3g1157	628	SUPERFAMILY	NAD kinase/diacylglycerol kinase-like	449	581	IPR016064	-
	Vvi3g1157	628	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	146	376	IPR027417	-
	Vvi3g1157	628	PRINTS	Disease resistance protein signature	168	183	-	-
	Vvi3g1157	628	PRINTS	Disease resistance protein signature	360	374	-	-
	Vvi3g1157	628	PRINTS	Disease resistance protein signature	256	270	-	-
	Vvi3g1157	628	PANTHER	DISEASE RESISTANCE PROTEIN RP	23	372	IPR044974	GO:0006952
	Vvi3g1157	628	Pfam	Diacylglycerol kinase catalytic domain	451	510	IPR001206	GO:0016301
	Vvi3g1157	628	Gene3D	-	139	321	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi3g1157	Vvi-Chr3	15765863	15776616	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi3g1157	391	607	Acyl Lipid Metabolism Gene Families	AT4G28130	29.707	9.50e-22	97.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi3g1157	-		-	vvi:104878918	1136.32