Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1156 ATGTCTCTCTTGTTCAAGCTGAACAATTCTTTTGTTAATTTTTTGTATAATTTGCACCTGACTTGTTCTCATAATTTCTTTTCTATATACAGCATCAAGTCAATTGTTTGTCTTAACTTGCCATGCTTTCTCGGTGAAGTAGACCCATGGGAACGATCAAATGTAAAGAAAAAAAGAGAAAGAAAATTTACGCCCTCTTTTGTAGATGATGGACTTCTTGAGGTGATCGGTTTTAAAGACTCTTGGCATGGTTGTGGAACCCGTCTTGCACAGGTGGATCGAATCCGCTTTGATCTTTACAAAGCTGCTGCTAACCATATTTACATGAACATTGATGGGAACATATGGAAGCAGCCCCTTCCCATTGATGATGACTCATTTCTGATTGAAATCTCTCATTTGGGTACCACTAAAATGCTTATGACTTCAAGTTCAAAGTGCAAATTCAAAAAGCAATCTCCTCCTGGTAGTCCAAAGATGGTTAAGCTTTCTAAAAAGTGA 501 0.3752 MSLLFKLNNSFVNFLYNLHLTCSHNFFSIYSIKSIVCLNLPCFLGEVDPWERSNVKKKRERKFTPSFVDDGLLEVIGFKDSWHGCGTRLAQVDRIRFDLYKAAANHIYMNIDGNIWKQPLPIDDDSFLIEISHLGTTKMLMTSSSKCKFKKQSPPGSPKMVKLSKK* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1156 166 PANTHER DIACYLGLYCEROL KINASE 17 145 IPR037607 GO:0004143|GO:0007165
Vvi3g1156 166 Pfam Diacylglycerol kinase accessory domain 8 114 IPR000756 GO:0004143|GO:0007205
Vvi3g1156 166 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 14 122 IPR016064 -
Vvi3g1156 166 MobiDBLite consensus disorder prediction 145 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1156 Vvi-Chr3 15758690 15760182 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1156 30 159 Acyl Lipid Metabolism Gene Families AT2G20900 50.000 6.67e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1156 K00901 - vvi:104878918 285.419