Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1152 ATGGCCACCGCCACTCCAAACCTTCTCCAACCTCCTAACTTTACATGCGTCAAATCCCTATCCGAATCTTCTGCTCTCACCTCCATCCCTTCCACCTACACCTTCACCACTGATCCCAATCAACTCCTCGCTTTTGAGCCACAGCACTCCATCCCCATCATCGACTTCTCCTTACTCACTTCTGGTGATCCTGATCAACGCTCCAGAGCCATCCAGGACCTTGACCAAGCCTGTCTGGAATGGGGCTTCTTCATGTTGATCAATCACGGTGTGCCGGAGAGTCTGATGACGGGGATGATTGAGGCGTGTAGAGGGTTCTTTGATCTGACGGAGGAGGAGAAGCGTGAGTTTCAGGGGACCCACGTTTTGTCTCCGATCAGGTGCGGCACAAGCTTCAATGCTAGGGTGGACCAGATTTTGTTCTGGAGGGATTTTCTGAAGGTCTTCGTGCATCCACAGTTCCACTCTCCCAGCAAACCAGCGGGCTTCAGTGAGGTTTGTCTAGAATATACACAAAGAATGAGAAAAGTGGCTGGAGAATTACTTAAAGGGATATCGAAGAGCTTGGGATTGGAAGAGTGGTATATAGACAAGACCATGAATATGGATTCGGGTTTACAAATCCTCACTGTCACTATCCACCCTTATGCAATGGGAATGCCGCCTCATTCAGACCACAGCTTCTTGACCATCCTCATACAGAATGGGATTGGTGGGCTTCAGGTGCAGCACAAAGGACAATGGTTCGATGTGAATCCAATCCCCAACTCCATTTTGGTTAACACAGGCGACCATCTTGAGGTTTTGAGCAATGGTAAGTACAAGAGTGTTTTGCATCGAGCGGTGGTGAACAACAAAACCACTAGGATATCATTGGCTCTTTCAAATGGACCATCGCTAGACACAGTCGTTGAACCAGTACCAGAGCTAAGTCATCCATTGAAATATGTTGGAATGGCATATAAAGAATACTTGGAACTTCAACAAGGAAACAAACTTGATGGGAAAACCTGCTTGGATCGAGTCCGAATCAGAACAATGTGA 1044 0.4751 MATATPNLLQPPNFTCVKSLSESSALTSIPSTYTFTTDPNQLLAFEPQHSIPIIDFSLLTSGDPDQRSRAIQDLDQACLEWGFFMLINHGVPESLMTGMIEACRGFFDLTEEEKREFQGTHVLSPIRCGTSFNARVDQILFWRDFLKVFVHPQFHSPSKPAGFSEVCLEYTQRMRKVAGELLKGISKSLGLEEWYIDKTMNMDSGLQILTVTIHPYAMGMPPHSDHSFLTILIQNGIGGLQVQHKGQWFDVNPIPNSILVNTGDHLEVLSNGKYKSVLHRAVVNNKTTRISLALSNGPSLDTVVEPVPELSHPLKYVGMAYKEYLELQQGNKLDGKTCLDRVRIRTM* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1152 347 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 47 325 - -
Vvi3g1152 347 Pfam 2OG-Fe(II) oxygenase superfamily 217 294 IPR044861 -
Vvi3g1152 347 SUPERFAMILY Clavaminate synthase-like 20 335 - -
Vvi3g1152 347 FunFam Uncharacterized protein 13 333 - -
Vvi3g1152 347 Gene3D - 13 332 IPR027443 -
Vvi3g1152 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 298 IPR005123 -
Vvi3g1152 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 51 153 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1152 Vvi-Chr3 15617726 15621748 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1152 51 344 Glycosyltransferase AT5G59530 32.390 7.30e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1152 - - vvi:100246869 695.271