Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1146 ATGCAGAACTTTCTTCCAGAAATTGAATACAGTATTGTTCTTCCTGGAAGTACAATTCCAGAGTGGTTCCAGCATCCAAGTATCGGATCCTCAGTAACAATAGAGCTGCCTCCAAATTGGCATAACAAGGACTTCCTGGGTTTTGCTCTATGCTCTGTGTTCTCACTTGAGGAAGATGAAATCATTCAAGGCTCTGGTCTCGTTTGTTGTAATTTTGAATTTAGAGAAGGGCCTTATTTGAGTAGCTCCATCTCTTGGACACACAGCGGAGACAGAGTGATTGAGACTGATCACATATGGCTGGTGTATCAACCTGGTGCTAAACTTATGATACCGAAGTCCAGTAGCCTCAATAAATTCAGGAAGATTACAGCTTATTTTAGTCTCTCTGGGGCATCCCATGTGGTGAAAAACTGTGGAATCCATCTTATATACGCCCGAGATAAGAAAGTGAACTATCAAACAAGGTATACTAGTGCCAAGAGAAGCAGTGATGGAAGTCGTTATTACTGTCTTGAGGAAACACAACCTAAGAAGCTAAGAGGAGGAGAGAACTGTGAGGAAGGATCCCATGCTTGA 579 0.4231 MQNFLPEIEYSIVLPGSTIPEWFQHPSIGSSVTIELPPNWHNKDFLGFALCSVFSLEEDEIIQGSGLVCCNFEFREGPYLSSSISWTHSGDRVIETDHIWLVYQPGAKLMIPKSSSLNKFRKITAYFSLSGASHVVKNCGIHLIYARDKKVNYQTRYTSAKRSSDGSRYYCLEETQPKKLRGGENCEEGSHA* 193
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1146 192 Pfam C-JID domain 14 148 IPR045344 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi3g1146 Vvi-Chr3 15520676 15521254 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1146 - - vvi:100245203 401.364