Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1140 ATGATGGGAGAGCTGTGTTTGGGGGCTCTGAAGCTGCAGGGGAGAAGGCAGAGCTTTTGGGGGTTGCAGATGGGACGGGATACGGCTGGCTTGCGGAGGAAGACAAGAAGAGAAGAAAAACAGGAAGAGGAAGGAAAAAAAAAGGGGGATCCTTCAGCTTGGGGAGGCGTTCGACAGGGGAGGAGAAACGCAGCAATCTCCTTGCGGATTTCAACTGGAGAGGAGTCTTTCAAGAAAACTTTTCGCTTCCCGTGGCTCGCCGATAATCTGATGTCTGAACATAGTTCATTAGATGGATCCGAGAGGGCGCGGAACGTGAACTGGTTTCCGGTGGCTGTCGCGGCTGCCGAGGATGCGGACGACGGAGGAGTGCTGTCGTCTCCGAATAGCACAGTCTCATTTTTTTAG 408 0.5343 MMGELCLGALKLQGRRQSFWGLQMGRDTAGLRRKTRREEKQEEEGKKKGDPSAWGGVRQGRRNAAISLRISTGEESFKKTFRFPWLADNLMSEHSSLDGSERARNVNWFPVAVAAAEDADDGGVLSSPNSTVSFF* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1140 135 MobiDBLite consensus disorder prediction 30 51 - -
Vvi3g1140 135 Pfam HD-ZIP protein N terminus 79 133 IPR006712 GO:0005634
Vvi3g1140 135 MobiDBLite consensus disorder prediction 30 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1140 Vvi-Chr3 15338627 15339433 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1140 K09338 - vvi:100265773 81.6481