Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1137 ATGGCCCACCCAAAAGACAAAGAACGACTGGTAGAGCGAACTTTCCAAGATGCTGTGCCAATTCTGCTTGGTCTTCTTTCTGAGGAAGGGACCAAAGGCCCCAACACTCAAGATCCTCCAGTGTCCAACACCCCAGATCATTATGCGTTGTTGAAACAAATCAGAGAGTACTTTGAGAACAGACAAGATCTGTTCCGTGACCTCAAGAGAACGGAAGACAAACTCCTGGAGAATTTCACTGCTCTTGAAGAAGAGATCGACAACTCTAAATACGGCAGTGATGGCAGCCGAGGGGAGCACTCTCTTTCAGACAGATTCAAGAGCATAACAGTCGACGTTTCTGAATTCGAACGTTTGGAATTAAAGAAGAGCGAGGAATCACCCAAAAATAATGAGTCAGAGGCTCAGGAAATGGAGATTTCAAAGAAATGGTCTGAATTAAAGGTGGAGCATGACATACTTAACGATTCAGTACTTTCTCGTTTTCAGTTGAGCTATGACAACATTATGGACATTGATCTGTGTCTGCTATGTTTCTCCGTATTTCCGCCCAAATCGGTCATCAAAAAGAGGCCCTTGATTTATTGGTGGCTTGGGGAGGGTTTGATCACCGAGACGGAAGATGGAGAACGCATCTTTGGGGAGCTGATCAAGAAGGGCCTTCTAATTGCAAAATACAAGCCAAATGAGCAAGACAAGAATCCTATTGTGGATAGCTGTACAATGCACTCTTGGAATCGCCTTATGCTGATCTCGGTTGCAAAAAGGGCTCAGTTCTTTGATTTTGATGATGACACAGGATTACCTGCTAATCACGGCACCAGCTCTCGCCGCATGTGTTTGCACCAAAACAGTTCCAGTAGGGCTGCATCCACGGAGCATCGTTTATTGACTTTGTTCAATGTGAATGAGCAATATGTCAATATCAGCAATATTAGAGGGTTTTCAGAGGAGAACAAAATTGAGGTTCTTCAGCTTGGGAGGTGGCAGGATTCAGCCAAGCACCATATAGAAGTCGAAAATGAAGACTTCTTGAAAGCTCTGGGGAGCAAGAAGCACTTGAAGTATCTCAGCCTGCGAGGAATTTCAAGAATCACTGAAATACCTTCCTCCCTTCGCAAGCTCATTAATCTTGAAATACTGGATCTCAGGGCGTGCCACAATCTGGAGAAACTACCATCTGACATTTCAGCTTTGAAGAAGCTCACGCATCTAGATATATCAGAGTGCCACTTGCTAGAAAGCATGCCCAAGGGCCTGGAGGAGCTGACTTCGCTCCAAGTGCTAAAGGGTTTTGTGGTAGCAACTTCAAAAAGAAGCCCTTGCAAGCTTGAAAAACTTGCTGTCTTGGACCAACTTAGAAAGCTGAGTATATATATCAGAAACGAAGCTTATATGGAAGAGCTTGATAAGTTGAGAAAGTTTTCAAAGCTTCGCATTCTATCGATAACATGGGGAGAAAGAGGAGCACAGGGTCCAAAAGAACAACCAGGAAAGCAAGCTACTGAGAGTAAGCCTTTCCCCTTTCCTCCCAAATTAGAGAAACTGGATCTTTGGTGTATCCCTGAAACCGACCCAGCTTGGTTAGACCCTGGTGAGCTTCTGAGTTTAAGGAAGCTGTACATTAGGGGAGGAAAGCTTGTTAGTTTCAAGGAGAGTAATACTGGTAAGAAGTGGGAAGTTCAGATTTTGCGTTTGAAATATCTACGTGCTTTCGATGAAAACAAACCCTGGCGGCGAAACTTCCCGTACCTCTGTTACTTGGAGATAGTAAAGAAAGCTGAGGATGAGCATCGAGCCAGCAGCAGCAGAATCTCTGCTCATAGACCATCCATCCCTAGTGGAGGCACTTTTAAACTTGATGCAGGATTGATTCCTCAACTATCATAA 1890 0.4434 MAHPKDKERLVERTFQDAVPILLGLLSEEGTKGPNTQDPPVSNTPDHYALLKQIREYFENRQDLFRDLKRTEDKLLENFTALEEEIDNSKYGSDGSRGEHSLSDRFKSITVDVSEFERLELKKSEESPKNNESEAQEMEISKKWSELKVEHDILNDSVLSRFQLSYDNIMDIDLCLLCFSVFPPKSVIKKRPLIYWWLGEGLITETEDGERIFGELIKKGLLIAKYKPNEQDKNPIVDSCTMHSWNRLMLISVAKRAQFFDFDDDTGLPANHGTSSRRMCLHQNSSSRAASTEHRLLTLFNVNEQYVNISNIRGFSEENKIEVLQLGRWQDSAKHHIEVENEDFLKALGSKKHLKYLSLRGISRITEIPSSLRKLINLEILDLRACHNLEKLPSDISALKKLTHLDISECHLLESMPKGLEELTSLQVLKGFVVATSKRSPCKLEKLAVLDQLRKLSIYIRNEAYMEELDKLRKFSKLRILSITWGERGAQGPKEQPGKQATESKPFPFPPKLEKLDLWCIPETDPAWLDPGELLSLRKLYIRGGKLVSFKESNTGKKWEVQILRLKYLRAFDENKPWRRNFPYLCYLEIVKKAEDEHRASSSRISAHRPSIPSGGTFKLDAGLIPQLS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1137 629 MobiDBLite consensus disorder prediction 26 45 - -
Vvi3g1137 629 Gene3D Ribonuclease Inhibitor 283 611 IPR032675 -
Vvi3g1137 629 Coils Coil 54 85 - -
Vvi3g1137 629 PANTHER DISEASE RESISTANCE PROTEIN RP 136 590 IPR044974 GO:0006952
Vvi3g1137 629 SUPERFAMILY RNI-like 307 589 - -
Vvi3g1137 629 Gene3D - 162 251 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1137 Vvi-Chr3 15262808 15265152 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1137 347 483 Miscellaneous Gene Families AT2G16250 35.036 7.92e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1137 - - vvi:100243468 1121.3