Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1135 ATGCCGATCCGAAGAAAACTTGAGGAAGCTGTACCAATTCTGCTTCCCCTTCTTGATAAAATGATGGAAGGTCTCAACAATCAAGACCCTGCGTTTGCTAAGTTGGAAGAGATCAGAGGGTATTTTGAGGGGAAGAAAGTTTTGTTCCCTAATCTCAAGACCGTGGAAGACGAGCTTCTGCAGAAATTCACCGTGCTTGAAGAAGAAATCGACAACTCTAAGTATACTAATACTGATGCCCCCCTAGGCACTCCCAGACATTCTTCCGTGAGGCTTGATTCCATTGTAAAAATATTCAACAGCATAGACGATCTTATTAAAAAATTCCAATCCTTGCAGATAGAAAGCACGGACACGTCCCGAAAAGAAGCCGAGTCAGCGGCTCATGAGGCAAGGGAGATTTCAGAAGAATGGTCTGCATTAAAGGTGGAGGATCTCATTCTTGGCTCCCCAGCAATGTCTTGTCTGCAGTTGAATTATAACATTCTTGATGTTCAGATGAAGCTGTGCCTGCTATGTTTCTCCATATTTCCGGCCAATTCGCTGATCAACAAGGGCTTTCTAATTGCACAATACAAGCCAAGCGACAAAGACCAAGACAAGAATCCCATTGTGGATAGCTGTAAAATGCACTCTTGGATTCGCCTTATGTTGATCAGGATTGCTAGAGATGCTGAGTTGTTTGATTCTGATGCCCCTGGCCCAGGCCCAGGCACCAGATCACGCAGCATATGTTTGGTTCCTCCGACCAACAATGTTTCTGCAGGGGGTCCTCCAAAACAACCAGCTAATCCGGCCACAGTCACAGAAGCAGGAGCGGGTCCTGATGCAAGCCGTTTATTGACTTTGTTCAATGTGAATGAGCAATATCTCAATATCCCCCATGACTGGTTTTCAAAGGAGAACAAAATTGTGGTTCTTCAGCTTGGGAGGTGGAAGGATTCAGCCAAGCACCACAATGAAGTCGAAAATGAAGACCACAAAGAAGTTGAAAATGAAGACCACATAGAAGTCGAAAATGAAGACTTCTTGAAAGCTTTGGGGACCAAGAAGCATTTGAAGTATCTCAGCCTGCGAGGAATTTCAAGAATCACTAAAATACCTTCCACAATCCGTAAACTCATTAATCTTGAAATACTGGATCTCAGGGCATGTCACAATCTGGAGAAACTACCATCTGACATTTCATCTTTGAAGAAGCTGACGCATTTAGATATATCAGAGTGCTACTTGCTAGAGAGCATGCCTAAGGGCCTGGACAAGCTGAGTTCCCTCCAAATGCTCAAGGGTTTTGTGGTAGCAACTTCAAAAAAGGGTCCTGGCAGGCTTGGAGATGTTGCTGGCCTGAAGAAACTTAGAAAGCTGAGTATATATATCCCAAGTGACGCTTATATTGAAGAGGCAGAGCTTAGTAAGTTGAAGGAGGCTGAAACTGAACCATCAGGAAAGCCAACCACCATAGATAGGAAAAAATCTTTCGCCTCAAAAAAGGACCGTCACCAAGTGCAGAGGACAGACATAAAGACGATGGGGTCCTTATCCTTTCCTCAAAAGTTAGAGAAACTGGATCTTTGGTGCATCCCTTGTGAAACCAAGCCAGATTGGTTAAATCCTGATGAGTTAAAGAGTTTAAAAAAGCTCTACATTAGGGGAGGAAAGCTTCATAGTTTGAGTTTTGAGGGGAATAACAAGAAGTGGAATGTTCGGATTTTGCGTTTGAAATATCTACATGATTTGCACGTAGATGAGGAACAATTGCGGGGTGACTTCCCACGCCTCATTCACTTGGAGATAAAAGATAAAATCATGGAAGGCAAAGGGGAGGATGAGCATGGAGGCAGCAGCCAGCAGCAGCAGGACCAGCGGTTTTTTGTAGCTTTTTTTTTCACACTACCATTGGAGATGAAAAGATTTAGAGGATTATTATTACTCTTTTTTTTTGGACAATAG 1950 0.4338 MPIRRKLEEAVPILLPLLDKMMEGLNNQDPAFAKLEEIRGYFEGKKVLFPNLKTVEDELLQKFTVLEEEIDNSKYTNTDAPLGTPRHSSVRLDSIVKIFNSIDDLIKKFQSLQIESTDTSRKEAESAAHEAREISEEWSALKVEDLILGSPAMSCLQLNYNILDVQMKLCLLCFSIFPANSLINKGFLIAQYKPSDKDQDKNPIVDSCKMHSWIRLMLIRIARDAELFDSDAPGPGPGTRSRSICLVPPTNNVSAGGPPKQPANPATVTEAGAGPDASRLLTLFNVNEQYLNIPHDWFSKENKIVVLQLGRWKDSAKHHNEVENEDHKEVENEDHIEVENEDFLKALGTKKHLKYLSLRGISRITKIPSTIRKLINLEILDLRACHNLEKLPSDISSLKKLTHLDISECYLLESMPKGLDKLSSLQMLKGFVVATSKKGPGRLGDVAGLKKLRKLSIYIPSDAYIEEAELSKLKEAETEPSGKPTTIDRKKSFASKKDRHQVQRTDIKTMGSLSFPQKLEKLDLWCIPCETKPDWLNPDELKSLKKLYIRGGKLHSLSFEGNNKKWNVRILRLKYLHDLHVDEEQLRGDFPRLIHLEIKDKIMEGKGEDEHGGSSQQQQDQRFFVAFFFTLPLEMKRFRGLLLLFFFGQ* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1135 649 MobiDBLite consensus disorder prediction 230 272 - -
Vvi3g1135 649 MobiDBLite consensus disorder prediction 244 258 - -
Vvi3g1135 649 SUPERFAMILY L domain-like 293 596 - -
Vvi3g1135 649 Gene3D Ribonuclease Inhibitor 285 604 IPR032675 -
Vvi3g1135 649 Coils Coil 313 333 - -
Vvi3g1135 649 MobiDBLite consensus disorder prediction 474 499 - -
Vvi3g1135 649 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 344 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1135 Vvi-Chr3 15200149 15202458 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1135 356 428 Receptor kinase-like Gene Family AT4G08850 42.466 1.56e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1135 - - vvi:104878912 1209.51