Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1122 ATGCCTTCTTTGTATCCCCATGCTGAAGGCATACTATATGCCCTCAAAGAGAAGGGAATTGATATGGCTATTGCTTCTAGATCACCAACTCCGGATATAGCAAAAACATTTCTTGACAAATTGGGCATCAAGTCAATGTTTGTAGCCCAGGAAATATTTTCCAGTTTATCACACAAGACACAGCATTTCCAGATAATTCATAGGACTGGGGTTTCCAAAATGAGAGTAACAAGCATTTTGGTAGGCAATGGGTTAAATATTGGAGCATTAAGCCAAGGGCTGACGAAATTCTCACAGAACTCAGCTTCATCTGGAAACACCAAACGGAACTGA 333 0.4054 MPSLYPHAEGILYALKEKGIDMAIASRSPTPDIAKTFLDKLGIKSMFVAQEIFSSLSHKTQHFQIIHRTGVSKMRVTSILVGNGLNIGALSQGLTKFSQNSASSGNTKRN* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1122 110 Pfam Acid Phosphatase 3 68 IPR010036 GO:0016791
Vvi3g1122 110 SUPERFAMILY HAD-like 3 70 IPR036412 -
Vvi3g1122 110 Gene3D - 1 71 IPR023214 -
Vvi3g1122 110 PANTHER MAGNESIUM-DEPENDENT PHOSPHATASE 1 MDP1 70 104 IPR010036 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1122 Vvi-Chr3 14837356 14838387 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1122 K17619 - vvi:109122378 198.364