Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1107 ATGGCTGCCGCAAACGCCCTTATCACCATGAAGGAGGTTCCGATGTTGCCGAGTTTGGGAATTAATCCTCAGTTTATAACGCTTACTCATGTCACGATGGAATCTGATAAGTATCTATGCGTTTGGGGAGACGGCTCCACAGAACAGTGTTGTAATCATTGA 162 0.4568 MAAANALITMKEVPMLPSLGINPQFITLTHVTMESDKYLCVWGDGSTEQCCNH* 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1107 53 Gene3D - 1 51 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Vvi3g1107 53 SUPERFAMILY Clathrin heavy-chain terminal domain 7 44 IPR016025 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1107 Vvi-Chr3 14402824 14402985 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1107 K04646 - vvi:109122292 110.538