Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1097 ATGATTCCAATTGAGGTTCAAGGAAGTGATTTGTTTAAGGTTCTCTTGCGAAGCAAGGATGGATCCTTAGAATTTACAAATAGAGAGATCCAAAGTAAACTTACACAAATCACTTTATTGCACCTCAATGGGAATCATTTTAGTGGTAAAATTCCAAGTGTTTTTAATAACCTTAGAAATTTAATTTCATTATCTATTTCTAGAAACAATTTTAGTGGGCAGCTTCCACCATCAATTGGAAATCTAACAAACCTTCAGGAGTTAGGCTTCTCTCATAACTTTAACTTGTTCAATGAGACAATACCATCTTGGTTGTATACTTTACCATCATTGGTAATATTAGATCTCAGTCATAACAAACTCACAGGACATATTGGTGAGTTCCAATTTGATTCATTGAAGTATGAATATCTTAATTCCAACTTGCTGCAAGGACCACTTCCAAATCCTCCAAATTCTACATTTTTCTTTTCAGTTTCCCATAACAAATTAAGTGGAGAAATCTCATCGTTGATTTGCAAAGCGAGTTCCATGGGAATTCTTGATTTGTCTAATAACAACTTGAGTGGAATGCTTCCTCATTGTTTGGGGAATTTTAGCAAAGATTTCTTTGACATATCCAAATCTTTTGGGAATTTGAAGTTGCTTGAATCATTGGACTTCTCTTCGAACAAGTTTATTGGGAGAATTTCGCAAGAATTAACAAGTTCAATATTTCTTGAAAAAGAAAAAAATTGGAGTACGCGTGTGTTGCCAAGAATTATACCTCGAGGCAATCACTTTGAGACATTTGGAAATGATTCATACAATGGGAACTCAGGGTTATGTGGATTTCATTATCGAAGAAATGCATAG 855 0.3404 MIPIEVQGSDLFKVLLRSKDGSLEFTNREIQSKLTQITLLHLNGNHFSGKIPSVFNNLRNLISLSISRNNFSGQLPPSIGNLTNLQELGFSHNFNLFNETIPSWLYTLPSLVILDLSHNKLTGHIGEFQFDSLKYEYLNSNLLQGPLPNPPNSTFFFSVSHNKLSGEISSLICKASSMGILDLSNNNLSGMLPHCLGNFSKDFFDISKSFGNLKLLESLDFSSNKFIGRISQELTSSIFLEKEKNWSTRVLPRIIPRGNHFETFGNDSYNGNSGLCGFHYRRNA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1097 284 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 28 125 - -
Vvi3g1097 284 SUPERFAMILY L domain-like 31 242 - -
Vvi3g1097 284 Pfam Leucine rich repeat 36 93 IPR001611 GO:0005515
Vvi3g1097 284 Gene3D Ribonuclease Inhibitor 22 284 IPR032675 -
Vvi3g1097 284 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1-LIKE-RELATED 31 149 IPR046956 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1097 Vvi-Chr3 14137802 14155287 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1097 41 277 Receptor kinase-like Gene Family AT3G28890 30.380 4.90e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1097 - - vvi:100256900 186.037