Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1095 ATGAAACACTGGAGCCTTTCGAAGAAGAAGATGCTTAGAAATTCTAGCATTCTTGAGTGCCCATTCAAAGAAAGCCCCAATAATACCCCTTCCATGGTGTTACCTGCCATGATAAACGTCCTCACAACTCTACGAAAAGCTGGTTTGCATAAGAAGATCAAAGTTTCAAGCACCCATTCCCTAGGAATTTTGTCTCAGTCATTTCCACCCTCTGCAAAGGTTTTTGATAACAACCATGCATTCCTTCTCAAACCCGTATTGGGATTTCTTGTTGAGAATCAGTCCCCTTTCATGGTTGATATTTATCCTTACTATGCCTACAGAGATTCCCCGAACAATGTGTCTCTAGACTATGCTCTATTTGAGTCATCCTCAGAAGCTATTGATCCAAACATTGGTTGGCCTTCAGAAGGATCACCTAAGAAGACAACTGCAACTCCTGATAATGCTTATAACACCAATCTCATCCGTCATGTCATCAATGACATCGACACTCCTGCAAAGCCAGGAAAGAAACTAGATGGCCATATCTTCTCATTGTTCAATGAGAACAGGAAGCCTGGTTTGGGATCTAAAAGGAACTGGGGATTATTTTATCCAGATCAAACAAGTGTTTATAACTTGGATATGACAGAAAAGGGTGTTGTAACCATGACTACTGAAGCAAATGTATCAAGCTCAAATGGGACATGGTGTATCGCATTGTCTACCGCTTCGAAAATGGACTTGTAG 732 0.4112 MKHWSLSKKKMLRNSSILECPFKESPNNTPSMVLPAMINVLTTLRKAGLHKKIKVSSTHSLGILSQSFPPSAKVFDNNHAFLLKPVLGFLVENQSPFMVDIYPYYAYRDSPNNVSLDYALFESSSEAIDPNIGWPSEGSPKKTTATPDNAYNTNLIRHVINDIDTPAKPGKKLDGHIFSLFNENRKPGLGSKRNWGLFYPDQTSVYNLDMTEKGVVTMTTEANVSSSNGTWCIALSTASKMDL* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1095 243 Gene3D Glycosidases 132 217 - -
Vvi3g1095 243 FunFam Uncharacterized protein 16 131 - -
Vvi3g1095 243 Gene3D Glycosidases 16 131 - -
Vvi3g1095 243 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 131 214 IPR044965 GO:0004553|GO:0005975
Vvi3g1095 243 Pfam Glycosyl hydrolases family 17 30 130 IPR000490 GO:0004553|GO:0005975
Vvi3g1095 243 Pfam Glycosyl hydrolases family 17 133 209 IPR000490 GO:0004553|GO:0005975
Vvi3g1095 243 SUPERFAMILY (Trans)glycosidases 27 208 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1095 Vvi-Chr3 14124096 14130739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1095 28 243 Glycoside Hydrolase AT5G56590 56.078 7.23e-88 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1095 - - vvi:100257740 357.451