Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1092 ATGATCTCCAAGAGATACCTCACACTTAAATTTTTCCCTCAAAAAGTGAAGTCAGCCTGTAAGATGCATTTGACCAAGCCTCTCAACAAAGATAACCAGACTGCTGAAGAATTATTTGCTGCTAGGAATGAGAGACTCCATCGAGATGCCAAGGAATGGCTAATGCGCACCACTGAGAATTGCACCATTCTTTCTGTTTTCATAGCCACTGTTGCCTTTGCAGCAGCCTACACGGTACCAGGAGGTCCTAATCAAGACACCGGTATTCCAATCCTTAACTCTAAACCCTTGTTTGTGGTTTTCATATTAGCTGATGTGTTCTCCCTCACTTTGGCTTTGACATCTGTGGGTATATTTCTCTCCATCCTTACATCCTCATTTCCACTACAAGACTTCGAAACATATCTTTTTAAGAAGCTGACACAGGGAATTATATGTATGATCCTCTCGGTCTCAATGATGGCGGTGGCGTTTGGAGCAACAATCATCCTGATCATGATGACACATAATTGGAAAAATGCTGTTTGGAGTGTGGTTGGATTTCTTCCTGTCCCCATTTTTTTTCTCTCATATTCACCTCTACGTTCAGCAGTCCTGGGACGTTGCACAGAATCTTCCAAAAATTTTGTTGCAAAATTCCTCAAAGGTGTTGCCATTGGGGTTGGAATATTCGTCTTTGTCCTCTTTTATTGTTTATATCTAGCTTTCAAAGGACTGTTCTGGACCGTGAAAAAGTCTTTTCGTTGGATTTGTGGGAATAAATCCGATACCCAATCTCCACAGCCAACTGCAGCTCCAATTACTCAACCCAAAATAGCCCCATGTGAAAATGGCCTCCGCTGCGAAATCACCATTTTGCTGCGAAATAATCTCCAAGCTTCGAAATGGCTGCGAAATCACCTCCAAGCTACGAAATGGCCTTCAGGCTACGAAATTGACTTGCGAAATGGAGGGGGGTTTGTGAAAACACCTTGCAAAGCCAAGGGATGTTGCGAAAATGCCAACAAAGCCCCGCACCATGCATCTGAAGAGGAGAGCCCCATGCACCCTGAGATCACACACAAGAAGTCTCTCACTCCATTTCTGACCTCCTTAAACCATCAAATCCCATAG 1113 0.4367 MISKRYLTLKFFPQKVKSACKMHLTKPLNKDNQTAEELFAARNERLHRDAKEWLMRTTENCTILSVFIATVAFAAAYTVPGGPNQDTGIPILNSKPLFVVFILADVFSLTLALTSVGIFLSILTSSFPLQDFETYLFKKLTQGIICMILSVSMMAVAFGATIILIMMTHNWKNAVWSVVGFLPVPIFFLSYSPLRSAVLGRCTESSKNFVAKFLKGVAIGVGIFVFVLFYCLYLAFKGLFWTVKKSFRWICGNKSDTQSPQPTAAPITQPKIAPCENGLRCEITILLRNNLQASKWLRNHLQATKWPSGYEIDLRNGGGFVKTPCKAKGCCENANKAPHHASEEESPMHPEITHKKSLTPFLTSLNHQIP* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1092 370 PANTHER CASKIN 12 227 - -
Vvi3g1092 370 Pfam Domain of unknown function 51 163 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1092 Vvi-Chr3 14043379 14059898 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1092 21 180 Miscellaneous Gene Families AT3G12360 28.834 9.53e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1092 - - vvi:100852691 501.13