Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1089 ATGCATTTGACCAAGCCTCTCAACAAAGATAACCAGACTGCTGAAGAATTATTTGCTGCTAGGAATGAGAGACTCCATCGAGATGCCAAGGAATGGCTAATGCGCACCACTGAGAATTGCACCATTCTTTCTGTTTTCATAGCCACTGTTGCCTTTGCAGCAGCCTACACAGTACCAGGAGGTCCTAATCAATATTCCAATCCTTAA 207 0.4396 MHLTKPLNKDNQTAEELFAARNERLHRDAKEWLMRTTENCTILSVFIATVAFAAAYTVPGGPNQYSNP* 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1089 68 Pfam Domain of unknown function 30 64 IPR026961 -
Vvi3g1089 68 PANTHER CASKIN 8 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1089 Vvi-Chr3 14023457 14023663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1089 4 63 Miscellaneous Gene Families AT3G12360 42.623 8.66e-06 39.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1089 - - vvi:100852691 133.65