Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1087 ATGTTTTGGCTCCCATACTTGAGGTTCCTCTCGCGAACGAAGGCTGCATGCAACTCTAAACCAGTTGGAAGCACTCCTCTCAGCTTCACTACCAAGTCTGTAATCACTGGTTTTCTCGGCTCTAGAAAGACCACCCTCTTGAATCATATTTTAACTTCACAACATGGAAAGCGGATTGCTGTGATAGAGAACGAGTTCAGCGAGGTGGATATTGATGGTTCATTGGCTGCTAGTTATTCTTTAGTGGCTGAAGATGTGTCATGGCTAATAAAGGATGTCTATGTTGTATCGTACGAGGAGATCAAGCGAAAATGCTCTGGGAATTGGTTGAGAAAAAGCGAGATAAATCTGATCATATCGTTATACAAACCATGGACCTTGCTAAACCGGCTCCTAACTCCCATAATCCCATGCAGGACTGTACCCATCCATACCCATTCTCTCTCTTACCATCTAATCATACCACTAAAACACCTTCTTCCCTTATATTCTCATACCCACTACCATGCTATCCTATTCTCCATACCACCCTCCTCATGCATTCCCATTATTCCTATTACTCTTCACACCTACCGAATCCCTCAAACCCATTTCCTCTCATTATCCTTCCATCATCCATACTCATTAAGCCCAGGTTCCTTCACCTGCTATCCGTGTCGTCCCCATCAATCACTCGCACCATTTTTGTCTCGCTTCCATCATCTTTCCCGTGAGTGTAGCCTCATTGAACCCCACACCATCATACTCATAACCCTATGTATTCTATACCCATCTTATACTCCACGCCCACGTTCTCAACCGTCTTCTCACTAA 813 0.4428 MFWLPYLRFLSRTKAACNSKPVGSTPLSFTTKSVITGFLGSRKTTLLNHILTSQHGKRIAVIENEFSEVDIDGSLAASYSLVAEDVSWLIKDVYVVSYEEIKRKCSGNWLRKSEINLIISLYKPWTLLNRLLTPIIPCRTVPIHTHSLSYHLIIPLKHLLPLYSHTHYHAILFSIPPSSCIPIIPITLHTYRIPQTHFLSLSFHHPYSLSPGSFTCYPCRPHQSLAPFLSRFHHLSRECSLIEPHTIILITLCILYPSYTPRPRSQPSSH* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1087 270 PANTHER COBW-RELATED 33 85 - -
Vvi3g1087 270 Pfam CobW/HypB/UreG, nucleotide-binding domain 33 78 IPR003495 -
Vvi3g1087 270 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 78 IPR027417 -
Vvi3g1087 270 Gene3D - 32 114 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1087 Vvi-Chr3 13817798 13819158 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1087 - - twl:120016205 96.6709