Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1082 ATGAGTGGAGCTGAGAAAGTGGTGTGCGTTACAGGGGCTTCTGGGTACATAGCTTCATGGCTGGTCAAGCTCCTGCTCCAACGCGGCTACACCGTCAATGCTTCAGTTCGCGACCCAGATGATCCAACGAAGACAGAACACTTACTCGCACTTGATGGAGCTAAAGAGAGGCTTCATTTATTTAAAGCCAACTTACTGGAAGAAGGAGCTTTTGATTCTATGGTTGATGGATGTGAAGGTGTTTTCCACACAGCATCTCCATTTTATCACACTGTCTCTAATCCACAGGTGGAATTAATTGACCCTGCAGTGAAGGGAACCCTCAATGTTCTCAGATCATGTGCAAAAGTTCCATCTATCAGAAGAGTTGTCGTAACATCTTCTATGGCAGCTGTTGCTTTCACTGGACAAACTTTAACTCCTGATGTGGTAGTTGATGAAACTTGGTTTTCTGATCCTGCAGTTTGTGAGAAACTGAAGCTTTGGTATATGCTTTCAAAGACCTTGGCCGAGGAGGCTGCCTGGAAATTTGCAAAAGAGAACAAGATTGACCTTGTTGCCATAAATCCAGGGCTGGTGATTGGTCCTCTCTTACAGCCAACTCTCAATACAAGTGTGGAGCCTGTTCTGAAACTAATAAATGGTACACAAACATTTCCTAATATAACTTATAGATGGGTTGATGTTAGAGATGTTGCCAATGCACATATCCAAGCATTTGAGGTTCCTTCAGCTAATGGAAGATATTGTTTAGTTTCCAGAGTTACACATTGTTCTGAGGTTGTGAAGATTTTACATGAGCTCTACCCCACATCCAATCTTCCTGACAAATGTGCAGATGACAAGCCTTTCGAGCCAACCTACCAGGTGTCCCAGGAGAGAGCAAGAAGCTTGGGCATCAACTTCATTCCTGTGGAGGTGAGCTTCAATGACACTGTTGAAAGCTTGAAGGAAAAGAAGTTCTTCAGTCTCTGA 975 0.4369 MSGAEKVVCVTGASGYIASWLVKLLLQRGYTVNASVRDPDDPTKTEHLLALDGAKERLHLFKANLLEEGAFDSMVDGCEGVFHTASPFYHTVSNPQVELIDPAVKGTLNVLRSCAKVPSIRRVVVTSSMAAVAFTGQTLTPDVVVDETWFSDPAVCEKLKLWYMLSKTLAEEAAWKFAKENKIDLVAINPGLVIGPLLQPTLNTSVEPVLKLINGTQTFPNITYRWVDVRDVANAHIQAFEVPSANGRYCLVSRVTHCSEVVKILHELYPTSNLPDKCADDKPFEPTYQVSQERARSLGINFIPVEVSFNDTVESLKEKKFFSL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1082 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 317 IPR036291 -
Vvi3g1082 324 Pfam NAD dependent epimerase/dehydratase family 8 245 IPR001509 -
Vvi3g1082 324 Gene3D - 6 324 - -
Vvi3g1082 324 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 313 - -
Vvi3g1082 324 CDD FR_SDR_e 8 299 - -
Vvi3g1082 324 FunFam Dihydroflavonol reductase 5 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1082 Vvi-Chr3 13241492 13249053 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1082 2 321 Miscellaneous Gene Families AT5G19440 71.250 2.15e-178 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1082 - - vvi:100265262 652.514