Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1081 ATGAGTGGGCAAGGCAAGGTGGTGTGCGTGGCTGGAGGTTCTGGCTACGTCGCCTCATGGCTGGTGAGGCTTCTGCTCCAACGCATCTACACCATCAAAGCCACAGTTCGAGACCCAAATGATCTAACAAAGACAAAACACTTGCTTGCACTTGAAGGTGCTAAAGAAAAGCTTCATCTGTTCCAAGCAAACTTACATGAAGAAGGACCCTTTGATTCTGTGGTTGATGGATGTGATGGAGGATTTCATACAGCATCCCAGTTGTTATGA 270 0.4741 MSGQGKVVCVAGGSGYVASWLVRLLLQRIYTIKATVRDPNDLTKTKHLLALEGAKEKLHLFQANLHEEGPFDSVVDGCDGGFHTASQLL* 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1081 89 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 86 - -
Vvi3g1081 89 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 87 IPR036291 -
Vvi3g1081 89 Gene3D - 6 89 - -
Vvi3g1081 89 Pfam NAD dependent epimerase/dehydratase family 8 86 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1081 Vvi-Chr3 13234256 13240287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1081 2 89 Miscellaneous Gene Families AT5G19440 67.045 5.54e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1081 - - vvi:100267759 150.214