Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1080 ATGAATGTTCTAAGATCTTGTGCAAAAGTTCCATCTTTCAAAAGAGTGATTGTAACATCATCAATGACTTCAGTTGCATTCAATGGGAAACCTCTAGCTCCTGATGTGCTAGTTGATGAGAGTTGGTTTTCAGATCCAGTTTTCTGTGAGAAATCAAGCTATGGTATATGCTTTCAAAGACGTTAG 186 0.371 MNVLRSCAKVPSFKRVIVTSSMTSVAFNGKPLAPDVLVDESWFSDPVFCEKSSYGICFQRR* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1080 61 Gene3D - 1 59 - -
Vvi3g1080 61 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1080 Vvi-Chr3 13233007 13233825 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1080 1 52 Miscellaneous Gene Families AT5G19440 67.308 6.64e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1080 - - vri:117928714 101.293