Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1079 ATGGGGACAGTCTCCAGTGTTGGCTCCAGATATGCCCGCTCTCAAAAGAGTAGTGATATTAGACAACCTAATTTATCGATGGATTTTGCGCAAGCTCTACCCGCTTTAAACCTACTTGAGAAATGTGCAGACGACAAGCCTTATGAACCAACCTATATGGTGTCCCAGGAGAAAACTAAAAGTTTAGGCATCAACTTAACTCCTCTGGAGGTGAGCCTCAAGGACACTGTGGAAAGCTTAAGGGAGAAGAACTTTGTCAGTTTCTGA 267 0.4419 MGTVSSVGSRYARSQKSSDIRQPNLSMDFAQALPALNLLEKCADDKPYEPTYMVSQEKTKSLGINLTPLEVSLKDTVESLREKNFVSF* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1079 88 Gene3D - 3 88 - -
Vvi3g1079 88 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1079 Vvi-Chr3 13223420 13230139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1079 4 88 Miscellaneous Gene Families AT5G19440 43.529 7.40e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1079 - - vvi:100267168 106.301