Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1072 ATGAGTGTTGAGTTTCTACCTCTTGCTAATAACAGTTTGTTCTTTCGGAAATCAGTTCTTTCAAATCTGATACAAGAGATAGAACCATTAGATGTGAGCCTTATTCAAAAAGATGTTCTGCCCACTACTGTTGATGCGATGAAACGAACTATCTCAGGTTTACTTCCATCCGACCAGTTTCACGTTGTAATTGAGGCTTTATGGCTACCACTCTCCAAGTTATTGGTTTCTTCAATGATGACTGGGTATACATTGCGGAATGCTGAATATAGACTCTGTCTTGAAAGAAACCTTGATATTTATGAAGGAAATACTGAGAAGCAAAGACCAGAAATATCTAAATCTGATGAGCTAGAGATGTCGTTTGACAGTGCGGATGTAAATAAATCTGGTAAACATGAGCTATCATCTAAATCTGAAGAAGATACCGAAAACCCATCAGAGGGTCTTGGTATTCAAGGCCTTGGTGAAATGACAGCTGAAGCTCAGCAATATATATTCTTCATTTACAGACTCAATTATCTTCTATCAAAAAGGTAA 540 0.3722 MSVEFLPLANNSLFFRKSVLSNLIQEIEPLDVSLIQKDVLPTTVDAMKRTISGLLPSDQFHVVIEALWLPLSKLLVSSMMTGYTLRNAEYRLCLERNLDIYEGNTEKQRPEISKSDELEMSFDSADVNKSGKHELSSKSEEDTENPSEGLGIQGLGEMTAEAQQYIFFIYRLNYLLSKR* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1072 179 MobiDBLite consensus disorder prediction 123 145 - -
Vvi3g1072 179 Pfam Protein of unknown function (DUF760) 20 98 IPR008479 -
Vvi3g1072 179 PANTHER OS02G0833400 PROTEIN 16 169 - -
Vvi3g1072 179 MobiDBLite consensus disorder prediction 123 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1072 Vvi-Chr3 13060155 13064641 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1072 - - vvi:100267925 281.567