Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi3g1068 | ATGATTGTGCATAGATCACCCTTTTTTGTGTGGTCCATTCCAATGACAACATTCCTATCACTTTTGGTACTAACAGGGGCAATTACCATCATTTCTTTCGTTTCTTCGATCATCCAGAGGTTTATATTCCCATTCTACTTAGATCTAGTATTCTTGGATCTCTTGTTTGGGCTCATCATATGGTCCATCTTTTTGTTTACCAGAGGAGGACTCATTGGAATAGTCATAGAAAATTATGGGCTAGACATTGTTCTACATGATACTTATTATGCGGTTGAACATTTCCATTGTGTACTTTCTATGGGAGTTGTTTTTGCTTTATTTGTAGTATTTCACTATTGGGTGGGTAAAATCTTTGGTCGGACATGCCTTGAAACTTTAGGTCAAATCCATTTTTAG | 399 | 0.3659 | MIVHRSPFFVWSIPMTTFLSLLVLTGAITIISFVSSIIQRFIFPFYLDLVFLDLLFGLIIWSIFLFTRGGLIGIVIENYGLDIVLHDTYYAVEHFHCVLSMGVVFALFVVFHYWVGKIFGRTCLETLGQIHF* | 133 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi3g1068 | 132 | PANTHER | CYTOCHROME C OXIDASE SUBUNIT 1 | 60 | 132 | IPR000883 | GO:0004129|GO:0009060|GO:0016020|GO:0020037 | |
| Vvi3g1068 | 132 | ProSiteProfiles | Cytochrome oxidase subunit I profile. | 21 | 132 | IPR023616 | GO:0004129 | |
| Vvi3g1068 | 132 | SUPERFAMILY | Cytochrome c oxidase subunit I-like | 1 | 132 | IPR036927 | - | |
| Vvi3g1068 | 132 | Gene3D | - | 49 | 132 | IPR036927 | - | |
| Vvi3g1068 | 132 | Pfam | Cytochrome C and Quinol oxidase polypeptide I | 22 | 132 | IPR000883 | GO:0004129|GO:0009060|GO:0016020|GO:0020037 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi3g1068 | K02256 | - | vvi:7498537 | 120.553 |