Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1062 ATGGTGAATCTATGCTTCTCTCATTTGGTTCTATTGAAATGCTATGACATGGCAAGTCCATATTGTATGTGCCATCTTGAATACAACATTGAAGAAATTGCTAATGAAGATGAACCCCCACCAAAAAGTTCCAAAAGTAAAAAGGAAAATGGACCAGAGAAATCACCCAATCTTGTCTTCAAAATAACTAGCAAAGTTCCATATAAGACAGTTCTGAAAGCTCACAGTGCTGTTGTGTTAAAGGCTGAGAGCGCAGCGGATAAGGCTGAGTGGTTAAACAAATTGAGAAATGTTATTCAGCCTTCAGGTCAAGTGAAGGGTGAATCTGGTCTTACCATGCGGCAAAGTCTTTCTGATGGTTCTCTTGATACAATGGCCAGAAGACCTACAGATCCAGAAGAACAGCTCCGATGGATGTCTCAAGCAGTGCGTGGTTATGTTCAAGCTGTTCTGAATAGCCTTGCTGCCAATGTCCCAAAATTCGTTGTTCTTTGCCAAGTAGAAAAATCCAAGGAAGATATGCTTAATCAGTTATACAGTTCTGTCAGTGCCCAAAGCACCGCAAGGATTGAAGAACTACTTCAGGAGGATCAGAATGTGAAACGAAGGAGGGAGCGTAACCAGAAACAATCCTCTCTTCTTGCGAAGCTCACAAAGCAGCTTAGCATCCATGACAACCGTGCAGCGGCTGCTTCTAGCAGCTGGTCCAATGGTGGTGCAGGCATTATAGTTGTTACTGTTTAA 744 0.4261 MVNLCFSHLVLLKCYDMASPYCMCHLEYNIEEIANEDEPPPKSSKSKKENGPEKSPNLVFKITSKVPYKTVLKAHSAVVLKAESAADKAEWLNKLRNVIQPSGQVKGESGLTMRQSLSDGSLDTMARRPTDPEEQLRWMSQAVRGYVQAVLNSLAANVPKFVVLCQVEKSKEDMLNQLYSSVSAQSTARIEELLQEDQNVKRRRERNQKQSSLLAKLTKQLSIHDNRAAAASSSWSNGGAGIIVVTV* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1062 247 Gene3D Dynamin, middle domain 75 204 - -
Vvi3g1062 247 MobiDBLite consensus disorder prediction 35 56 - -
Vvi3g1062 247 MobiDBLite consensus disorder prediction 35 54 - -
Vvi3g1062 247 FunFam Dynamin-2A 96 204 - -
Vvi3g1062 247 Coils Coil 190 210 - -
Vvi3g1062 247 ProSiteProfiles PH domain profile. 1 100 IPR001849 -
Vvi3g1062 247 PANTHER DYNAMIN 13 217 IPR022812 -
Vvi3g1062 247 ProSiteProfiles GED domain profile. 136 229 IPR020850 -
Vvi3g1062 247 Pfam Dynamin GTPase effector domain 133 218 IPR003130 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1062 Vvi-Chr3 12864198 12866540 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1062 K01528 - vvi:100245514 374.015