Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1055 ATGCATTTGACCAAGCCTCTCAACAAAGATAACCAGACTGCTGAAGAATTATTTGCTGCTAGGAATGAGAGACTCCATCGAGATGCCAAGGAATGGCTAATGCGCACCACTGAGAATTGCACCATTCTTTCTATTTTCATAGCCACTGTTGCCTTTGCAGCAGCCTACACGGTACCAGGAGGTCCTAATCAAAACACTGGTATTCCAATCCTTAACTCTAAACCCTTCTTTTTGGTTTTCATATTAGCTGATGTGTTCTCCCTCACTTTGGCTTTGACATCTGTGGGTATATTTCTCTCCATCCTTACATCCTCATTTCCACTACAAGACTTCGAAACATATCTTTTTAAGAAGCTGACACAGGGAATTATATGTATGATCCTCTCGGTCTCAATGATGGCGGTGGCATTTGGAGCAACAATCATCCTGATCATGATGACACATAATTGGAAAAATGCTGTTTGGAGTGTGGTTGGATTTCTTCCTGTCCCCATTTTTTTTCTCTCATATTCACCTCTACGTTCAGCAGTCCTGGGACGTTGCACAGAATCTTCCAAATATTTTGTTGCAAAATTCCTCAAAGGTGTTGCCATTGGGGTTGCAATATTCGTCTTTGTCCTCTTTTATTGTTTATATCTAGCTTTCAAAGGACTGTTCTGGACCGTGAAAAAGGCTTTTGAGTTTATTATATGTAAACCTGTTCGTTGGATTTGTGGGAATAAATCCGATACCCAATCTCCACAGCCAACTGCAGCTCCTATTACTCAAGTTTGA 774 0.4096 MHLTKPLNKDNQTAEELFAARNERLHRDAKEWLMRTTENCTILSIFIATVAFAAAYTVPGGPNQNTGIPILNSKPFFLVFILADVFSLTLALTSVGIFLSILTSSFPLQDFETYLFKKLTQGIICMILSVSMMAVAFGATIILIMMTHNWKNAVWSVVGFLPVPIFFLSYSPLRSAVLGRCTESSKYFVAKFLKGVAIGVAIFVFVLFYCLYLAFKGLFWTVKKAFEFIICKPVRWICGNKSDTQSPQPTAAPITQV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1055 257 PANTHER CASKIN 9 211 - -
Vvi3g1055 257 Pfam Domain of unknown function 30 142 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1055 Vvi-Chr3 12630164 12630937 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1055 1 159 Miscellaneous Gene Families AT3G12360 28.395 1.14e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1055 - - vvi:104878893 516.153