Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1052 ATGTTCTCCTTTGTTTCTGGTCTGTTCAAAGTGTTGGATATCTCAGCTGGGTTGATCATTTTGGTTGGGATATTTATGGGAGAGCCCCATGAGAAGCTCAATTCTCATACAAACGAAAATTTCTGGATACCTGTGCTCACTTCCATACCCATCATCGCCTTCTTCGTGCCCACCAGACCCTCCCCGGTCTTCGGCATTATATCCTCCCTTCAGGCATATAAGAAGATTGGTTTCAGAAATAAAAATTATGTTCCTGTTGGTGTTCGTGGAGTATTTGGAGGAGTGGTCCAAAATATGCATCTCCACTGGAAGTTCCATGAGACTGTTCAAGTTTGCTGTGATAACTTCCCAAAGGAAAAAATCAAGGAGATGGCGCTTGAGGAGTATGAGAAGGTGTTGGAAGTAATGTCTTGA 414 0.4324 MFSFVSGLFKVLDISAGLIILVGIFMGEPHEKLNSHTNENFWIPVLTSIPIIAFFVPTRPSPVFGIISSLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMALEEYEKVLEVMS* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1052 137 SUPERFAMILY YhbY-like 71 125 IPR035920 -
Vvi3g1052 137 Gene3D - 68 134 IPR035920 -
Vvi3g1052 137 Pfam CRS1 / YhbY (CRM) domain 70 125 IPR001890 GO:0003723
Vvi3g1052 137 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 70 127 IPR040286 -
Vvi3g1052 137 ProSiteProfiles CRM domain profile. 60 137 IPR001890 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1052 Vvi-Chr3 12618756 12619709 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1052 - - egt:105969712 122.479