LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi3g1048	ATGTTCATCAACTCACCACCATTCTCCTCATTTGCGTTCCACATTCTGGGTTGCCTTCAGGTGAAGACGAGAGCCAAAACTAATGAACAACTATCCAAGATTTCATCTAATGAGGAAATGAAGGAAGTGGGTTCTTTCTATGAAATCTGTCACTCAAAGCTGCCTTCCGATTCGCTATCTCAACTCCATTCTTGTCGCGTTGTCATGATGAGTAAGAAGACTGAACATGATGTGTTAGTGAGGTTCCCATACAGGATGTCGAGCTGTGAAAACTTCAGGGGTGAAGCCAGTGGGGGGGTGAATGGAATAATGTATTCTGCACTGAAAAAGAAGTGGGAGATGGTGGGTCAACAGTCTCTGACCTATAGCTATGTGGTCCGTGGCACGGGGATCCTTAACGAGTATACCGAGTTCACCGTTGACCGAGTTGAAGATGACTTCAACAAGAGATGTGGTGGTGAGAAAGTTGCAGTTGCCGTTATTCTTGACCTGAATACAGGGTCTGATCCCAAACTGAAGGAACATATGCAGTACTGTGTAGATCATCCTGAAGGATCAACAAACTTGCCAAAAAGAAGGGCTTAG	585	0.4496	MFINSPPFSSFAFHILGCLQVKTRAKTNEQLSKISSNEEMKEVGSFYEICHSKLPSDSLSQLHSCRVVMMSKKTEHDVLVRFPYRMSSCENFRGEASGGVNGIMYSALKKKWEMVGQQSLTYSYVVRGTGILNEYTEFTVDRVEDDFNKRCGGEKVAVAVILDLNTGSDPKLKEHMQYCVDHPEGSTNLPKRRA*	195

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi3g1048	194	PANTHER	SNARE PROTEINS	141	190	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi3g1048	Vvi-Chr3	12421621	12422888	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vvi3g1048	140	194	Miscellaneous Gene Families	AT1G04760	52.727	3.59e-12	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi3g1048	K08511		-	vvi:104878890	207.994