Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1047 ATGTCTACGGTTTTGGAATTGTTGCATTGGAAATTTGCTGTGGAAGAAGTGTCATGGAAACTGGAAACAAATGACACAGGACATCAGATCACATTGGTGGAGTGGGTTTGGGACCTCTATGGCGTTGGGAAGCTTCTTGAAGCAGCTAATCCAAGACTATCTACAGATTTTGATGAGCAACAGGTGGAACGATTGATGATTGTTGGTCTTTGGTTTGCTTACCCGAATTGCAATGCTCATCCTTCAATGAGGCAAGCAATTAGTGTCCTTAATTCTGAAGCTTTATTGCCTCTTCTTCCTATAAAAATGCCCGTGCCAATGTATTATGCACCTCCAGCGCTGCAAACATCCTATAGCACTAGCGTTTATGAGAGAAACCACGCCCAGTTTTCCAACTCCCCTAATGGCACAACGGACTCATCAAAATTCTCGGAGTCTTCTTCAACCTTTTCTCAATCCGCATCCCTATTGCACACACGCTGA 483 0.4389 MSTVLELLHWKFAVEEVSWKLETNDTGHQITLVEWVWDLYGVGKLLEAANPRLSTDFDEQQVERLMIVGLWFAYPNCNAHPSMRQAISVLNSEALLPLLPIKMPVPMYYAPPALQTSYSTSVYERNHAQFSNSPNGTTDSSKFSESSSTFSQSASLLHTR* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1047 160 Gene3D Transferase(Phosphotransferase) domain 1 3 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1047 Vvi-Chr3 12363372 12363854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1047 5 109 Receptor kinase-like Gene Family AT5G10530 46.296 7.15e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1047 - - vvi:100246922 313.153