Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1031 ATGAATCTCAATTCAACAAACAACCTAAGAATGATGAGTACCGTTCAATGGCTGCTTCAGATCTCCTTATTACTATGGCTAAGCAAAGGATTAGCAGCAACTCAAGCGAAGCCTGGTTGTCAAGAGAGGTGTGGAGACGTTGACATTCCATACCCCTTCGGAATTGGATCTGCTGGTTGCTACTTCGATGAATGGTTCGAAGTAACTTGCAACAACTCTACCGACCCTCCTAAGCCTTTCCTGAAAGGAGTAAATCTGGAGGTGCTGAATGTTTCATTAGATGGCACCATCCGGGTCAACAACCCAGTACTCCTTTCTCAGAATTGTTCCGGCAAACCATCAAATGACACGCAGTGGTGGGAGGGAGGCCCCTTTTCATTCTCCAACACCTACACTAGATTCACTGCTGTGGGTTGCAGCGCCCTGGTCTACATTATGCAGGATGATACAGTAATCGGGGGATGCATGACCTTCTGCAAAAAGGACGCAACTGCGGCAAAGAAAGCCAGCTGCTATGGCTTGGAGTGTTGCCAAACCCAAGTCCCTCCAGGCCTCCTGTCCTTCACTGCAAATTTAGGAACCTTTTCTGATGGTAGTGCTGATGAGCAAGAACAATGCAAATTCGCGTTCATGGTGGACCAAGAATGGTTTATCTCAAATGTACCAGATCCACATACGGTGAAAGATATGGAATACGTTCCAGCAGTGCTGGACTGGCGGATATACAACGCAACGTGCGCTGCCTCCACCTCAAACCTCAACACATCCACAAGTTTTTGTGGCGAGAATACCCTTTGTTCAACTGACACTCAAACCTCAAGTCTCATCTGCAGTTGTTTCCCGGTATATGAAGGCAACCCTTATCTTCCCCAAGGATGTCAAGGTACACAATCTATAGAGGAGTGCTAA 909 0.4708 MNLNSTNNLRMMSTVQWLLQISLLLWLSKGLAATQAKPGCQERCGDVDIPYPFGIGSAGCYFDEWFEVTCNNSTDPPKPFLKGVNLEVLNVSLDGTIRVNNPVLLSQNCSGKPSNDTQWWEGGPFSFSNTYTRFTAVGCSALVYIMQDDTVIGGCMTFCKKDATAAKKASCYGLECCQTQVPPGLLSFTANLGTFSDGSADEQEQCKFAFMVDQEWFISNVPDPHTVKDMEYVPAVLDWRIYNATCAASTSNLNTSTSFCGENTLCSTDTQTSSLICSCFPVYEGNPYLPQGCQGTQSIEEC* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1031 302 PANTHER OSJNBA0016N04.9 PROTEIN 14 297 - -
Vvi3g1031 302 Pfam Wall-associated receptor kinase galacturonan-binding 40 100 IPR025287 GO:0030247
Vvi3g1031 302 Pfam Wall-associated kinase 169 251 IPR013695 GO:0004674|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1031 Vvi-Chr3 11921645 11922553 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1031 11 302 Receptor kinase-like Gene Family AT1G16260 32.573 9.54e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1031 - - vvi:100854955 581.252