Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1012 ATGGTGGGACTCAGTATTGTATTGGAAACCCAAAAAGGTATTAACAAGAAAACCCAAGTCATTAACAAAATCACCATGATGACCAAACCCACTCATTTTCCTTCACCTCCTGCACGTTGGAATTCTCACTCACCTCTTCTTCCGGCGGCCACCACTTTTCTCGACGAGTGCTTTCTCTGCAAGCAGAAACTCTTGCTTGGAAAAGACATCTACATGTACAAAGGAGACAGAGCTTTTTGTATGTGGAGTTGGTGCAAGGATGGCGCACAACCATGGAAATGCTCATGTTGCTTACCCTGA 300 0.4467 MVGLSIVLETQKGINKKTQVINKITMMTKPTHFPSPPARWNSHSPLLPAATTFLDECFLCKQKLLLGKDIYMYKGDRAFCMWSWCKDGAQPWKCSCCLP* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1012 99 PANTHER FCS-LIKE ZINC FINGER 5 13 80 - -
Vvi3g1012 99 ProSiteProfiles Zinc finger FLZ-type profile. 52 99 IPR007650 -
Vvi3g1012 99 Pfam zinc-finger of the FCS-type, C2-C2 51 80 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1012 Vvi-Chr3 11468536 11468835 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1012 - - vvi:100261891 156.762