Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1008 ATGGGTTTTATGAATGTTCTCAAGTTCTCAGCTGCATGCTTTGATATTCTTGCCTGGCCTCTATTTGCACTGGGTTATCCTCTATGTTCTTCAATTCGGGCAATTGAGACTAACTCAATCTCAGACTTTCGGAAGTTGGTGGCGTATTGGGTTCTATTTTCCTTGATTTCACTCTTTGATCATGCTTTTTCCAAGCTCCTTGAATGGTAA 210 0.4048 MGFMNVLKFSAACFDILAWPLFALGYPLCSSIRAIETNSISDFRKLVAYWVLFSLISLFDHAFSKLLEW* 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1008 69 Pfam TB2/DP1, HVA22 family 27 69 IPR004345 -
Vvi3g1008 69 PANTHER HVA22-LIKE PROTEINS 5 69 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1008 Vvi-Chr3 11420640 11421187 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1008 - - vri:117910905 143.28