Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1005 ATGATGATCAAAACTCTGAGCCATTCTCGCAAAAGGGTTTTACTGTCATGTCGTCATAAGAAAAGCATTCTTTTAGAAAGGATACCAGTTGATATTAATGGAAAAGAAGAAACAGCTATGAAGTTTGATTTGGATGGGTTTGTTGTCATCGGTAGAGTTGACTCAAGCATAAATGCTTGCCTACTTGCTGAAAGCTTAGGAAGTTCTGATGATGGGATGCCTCGGTATTGTGGATTGATTCACAAGGAAAGGAGCCAACGGGTGGAGTCAAATTTGTGGCCTCGTGTATTTTATAGTGGTGACAGAGTTACACAGATTCAAGTTAAGGGATTGGGATTAAAGGGACCTCTCCCTCAAAACTTCAACCAGCTTTCAATGCTCTGCAATTTGGGGTTTCAGATGAACCACTTCAATGGAAAATTGCCTTCTTCTCGCAGATTGTCTGAATTGCAACTCGCCTTCTTCGATTACAACGAAGTCGACACCACCCTCGCTGATTTCGTTGATGGCCTTACAAGTATTCGGATCCTTGCTCTGGATGACAATCCATTCAATGGAACTATTGGTTTACATTATTTGCAGGGACAATTAGAAAGCTATCAGTCACCAAAACCGAAACGTCAGAATGGGATCTCACTGGCTAGAACCTTTTTGGCAGTTAGCTTAGTTGCTCCTGTGATGGCTCCAGCAGGGACAACACATACTGCTGCTAAAGAATTTTCTTGA 726 0.4201 MMIKTLSHSRKRVLLSCRHKKSILLERIPVDINGKEETAMKFDLDGFVVIGRVDSSINACLLAESLGSSDDGMPRYCGLIHKERSQRVESNLWPRVFYSGDRVTQIQVKGLGLKGPLPQNFNQLSMLCNLGFQMNHFNGKLPSSRRLSELQLAFFDYNEVDTTLADFVDGLTSIRILALDDNPFNGTIGLHYLQGQLESYQSPKPKRQNGISLARTFLAVSLVAPVMAPAGTTHTAAKEFS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1005 241 Gene3D Ribonuclease Inhibitor 82 202 IPR032675 -
Vvi3g1005 241 PANTHER OSJNBA0070M12.3 PROTEIN 91 186 - -
Vvi3g1005 241 SUPERFAMILY L domain-like 90 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1005 Vvi-Chr3 11359880 11360865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g1005 92 209 Receptor kinase-like Gene Family AT1G67720 27.273 1.67e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1005 - - vvi:100253071 161.77