Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g1001 ATGGAATATTATTTGCAGAAGACATACTACAAGACTGCATCTTTGATTTCAAACAGCAGCAAGGCTAGTGCTCTTCTTGCAGGGCAAACTGCGGAAGTTTCAATGTTGGCCTTCGAGTATGCCAAGAATCTGGGATTGGCATTCCAATTAATAGATAACGTCCTTGATTTCACAGGCACATCAGCTTCCCTGGGGAAGGGTTCATTGTCTGACATCCGTAATGGAATAATAACAGCCCCAATATTGTTTGCTATAGAAGAGTTCCCTCAATTGGATGCTGTTGTCAAACGCGGCCTTGACAATCCTGCAGATATTGATCTTGTCAGTTTCTGA 333 0.4264 MEYYLQKTYYKTASLISNSSKASALLAGQTAEVSMLAFEYAKNLGLAFQLIDNVLDFTGTSASLGKGSLSDIRNGIITAPILFAIEEFPQLDAVVKRGLDNPADIDLVSF* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g1001 110 Gene3D Farnesyl Diphosphate Synthase 1 109 IPR008949 -
Vvi3g1001 110 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1 106 - -
Vvi3g1001 110 Pfam Polyprenyl synthetase 1 104 IPR000092 GO:0008299
Vvi3g1001 110 SUPERFAMILY Terpenoid synthases 1 99 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g1001 Vvi-Chr3 11315079 11316798 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g1001 K14066 - vvi:104878878 212.231