Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0993 ATGGGGAAGAAGAGGATAATGCTACCAGTGGAGGAAGTGGACATATCTGCGGTGAAATATGAGAATGAAGTCATCAAAGCTCCACATTTGACTGGGTTCTTGTTGAAGTTGTTTGTTAAGATAATTGAAGCTCCATTGCTTGGTTCTTTGATCGTATATTTGATGAAGAAGGAGAATAGGATGGTTGAGTTGTTGCGGAACACTGTGATTCCTGAGGCACCCATGTTTAAACCTGAGTTTCCTCCACAAGAACCTGAACCTGGTGTAATCATCATGGAAGAAGATGGAAAGCCAGAAGACCGAGTTGAATCAGCCTTGAAGTGTCTTCCACATTATGATCCTGCTAGTCTCTGGAATGCTGATTCATCTCCATTCCGATACTGGAAGATACGTGATTATGCACATGCTTATCGGTCTAGGCTTGCAACCCCTTCTATGGTTGCAGAGCACTTCATCTCAGTTATGGAAGAGTTCAGAAATAAGAAGCCCCCAGCACCATTATTGGTTTCTTTTGATGCTGAGGACCTAAGAAAGCAAGCTGCAGCTTCTACACAAAGGTTTCAGGAAGGAAATCCCTTATCTATCTTGGACGGTATTTTTGTGGCAATCAAGGATGATATAGATTGCTTACCTCATCCTTCTAAGGGTGCAACAATATGGATGCACGAGGTTCGTCCTGTTGAAAAGGATGCAGTTAGCGTTTCAAGACTGCGTAGCTGTGGTGTTATTTTTGTGGGGAAGGCAAATATGCATGAGTTGGGCCTGGGAACCAGTGGAAATAATCCAAATTATGGAACAACAAGAAACCCCCATGCACCAGAAAGGTATACTGGTGGATCTTCCTCAGGCCCAGCAGCACTTGTAGCTTCCGGACTATGTTCAGCTGCACTGGGAACTGATGGTGGAGGTTCAGTTCGTATTCCTTCTTCACTTTGTGGTGTAGTGGGCTTGAAAACAACATATGGACGGACTTCTATGATAGGGTCAATATGTGATTCTGGGACTGTGGAAATTATAGGCCCCATTGCATCAATGGTTGAGGATGTCATGCTAGTGTATGCAGCCATCTTGGGCTCCTCTCCTGCTGATAGAATCTGTTCAAAACCGGCACCTCCTTGTTTGCCAAATTTATCATCATCTGAAAGCTTGAATGTGATGGGAACACTGCGCCTGGGGAAGTACACACAGTGGTTTAATGATGTATACTCAACTGATATCTCTGATAAGTGTGAGGATGTGCTCAATATGCTATCCAAAAACCATGGGTGCAAAGTAACAGAGATTATAATACCAGAACTGAACGAGATGCGCAATGCTCATATTGTTTCAATTGGCTCTGAATCAGTATCTTCATTAAATCCTCATTGTTATGATGGGAAAATATCGAAAATGACATTGGATACACGCACTAATCTGGCACTATTTAGGACATTCGCTGCATCAGATTATGTTGCTGCCCAATGTCTGAGGAGAAGGCTAATGTACTACCACATGGAGATTTTCAAGAATGTTGATATCATAGTGACCCCAACAACTGGTATGACGGCACCTATAATATCCCCTAGTGCTCTTAAATTTGGGGAATCAAATCTTCAGGTTGGAGGTTACCTCATGCGGTTTGTTGTAGCCGCAAATCTTCTTGGACTTCCTGCCATTTCTGTCCCTGTTGGTTATGATAAACAAGGACTTCCAATAGGCTTACAACTCATAGGCCGGCCATGGGGCGAAGCTTCAATTTTGCGATTGGCTTCTGCAGTGGAGGAACTCTGTGGTGAGCCTAAGAAGAAGCCTGCACAATTTTATGATATCTTGAAAGTGAAATAG 1824 0.4326 MGKKRIMLPVEEVDISAVKYENEVIKAPHLTGFLLKLFVKIIEAPLLGSLIVYLMKKENRMVELLRNTVIPEAPMFKPEFPPQEPEPGVIIMEEDGKPEDRVESALKCLPHYDPASLWNADSSPFRYWKIRDYAHAYRSRLATPSMVAEHFISVMEEFRNKKPPAPLLVSFDAEDLRKQAAASTQRFQEGNPLSILDGIFVAIKDDIDCLPHPSKGATIWMHEVRPVEKDAVSVSRLRSCGVIFVGKANMHELGLGTSGNNPNYGTTRNPHAPERYTGGSSSGPAALVASGLCSAALGTDGGGSVRIPSSLCGVVGLKTTYGRTSMIGSICDSGTVEIIGPIASMVEDVMLVYAAILGSSPADRICSKPAPPCLPNLSSSESLNVMGTLRLGKYTQWFNDVYSTDISDKCEDVLNMLSKNHGCKVTEIIIPELNEMRNAHIVSIGSESVSSLNPHCYDGKISKMTLDTRTNLALFRTFAASDYVAAQCLRRRLMYYHMEIFKNVDIIVTPTTGMTAPIISPSALKFGESNLQVGGYLMRFVVAANLLGLPAISVPVGYDKQGLPIGLQLIGRPWGEASILRLASAVEELCGEPKKKPAQFYDILKVK* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0993 607 SUPERFAMILY Amidase signature (AS) enzymes 126 594 IPR036928 -
Vvi3g0993 607 Pfam Amidase 168 580 IPR023631 -
Vvi3g0993 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
Vvi3g0993 607 PANTHER TRANSAMIDASE 123 604 IPR000120 GO:0003824
Vvi3g0993 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0993 Vvi-Chr3 11113868 11140400 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0993 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 68.257 0.0 883
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0993 - - vvi:100262954 1203.73