Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0983 ATGGAGCTGGTTCGGGAAGAACCCAGCCCCAATGGAGAGGTGGAGGAGGACAATGACAGAGACCTCTCTGGGGATACTCCTCTCAAGGAGACTCGCCATAATCGGACACATTTTCCTGGTGCCGTGAGAAAGAAAGCATATATATTCAATGGGTACGGCGAATTCTATAACAAGGAATGGGATCTTGCTGAAGGCACAGGCAATGAGTTTTGTTGGTACCATGTTGAACTCCCAAAAGGGAATCAGAAACTCTCACAGGCTGCACAACATCTCATTGATGTTCTTTGCCCACCTTTGAAACTCCAGGACATTCTCTCACTTGTTAGCAATGGACCTTTTTGTGGGCATGTTGATGGGGCACTTGTGTTTAGAGTCAATTCACCGGGACCTGCCTCGAGTGATTTTACGTTCCGAATAGCTGCAAGAATTACTGAGAGTTCAGTGATTACGGTGTCCCTGGGCCGTGTTCCCAGGTTGGGGTTCTCACCAATGGGTGAATCTCTACTTTCAGAGGTCCCAAGAGTGGAGAGTCCTAGTTATGTTAGAGGCGAGAGGAAGGAAGGGGGTGGAATTGTGATCAGGGAGCATGTTCTTGAGTTTCTGTTGACAATGAATCATTCTGAGGGGGGCGATAATCCTGTACCTAGAACTGTATCAAATCTTGTTGTTCACATTATTGATACACATGTGGACCAACTCCAAGATCTTGTGACTAAACTTGAAATGGAGTTGGATTCAGTGGAGTTTGAAATGGATAAAGGTGGTTTTGCTTTGAAGAAACAAATGCTGGATGACAGGAGATTCCCAAAATTGCATCTTAATTTGCAGCGACTCTTGCAGGTAATAGCACATGGGGAGCAAGTGTTTCCTAGAGTCAAGGAAAAGTGCTCTTCAAAACGATGGTTTGCCAACGAGGATATTATCTCACTTGAAGAGTTAATTGGACGGCTCAGGAGGTTAAAAGAGAATGTTGGGTTTATAGCCAATCGTGTTACAGCAATCCAGGCTGGTCTTGATAGCTGGCAAGCTGAGCAAATAAACAGGAAATTATATTATCTCTCATTCCTCTCAATAATATTCCTTCCCTTATCCATCATCACTGGAGTGTTTGGGATGAATGTGGGAGGAGTTCCATGGACAGGACAACGAGACCCAGCTCTAAAAAATGGGTTCCGCAACGTCATGTTACTGTGTGTGATGATGTTATTTCTAGTGCTCTTATGCTTTGCTTTCCCAGCTATCTATGCCCGTATAGCTTCTTGGCGGAGACGAAGGGCTTTGCGGAGAAGCTGGTCGCTCAACAGGAAGTCATTCCTTAAGAGAATCCCCGGCGGATCCGAAAGAGGGGGTTATCTTAGGATTTGA 1365 0.4535 MELVREEPSPNGEVEEDNDRDLSGDTPLKETRHNRTHFPGAVRKKAYIFNGYGEFYNKEWDLAEGTGNEFCWYHVELPKGNQKLSQAAQHLIDVLCPPLKLQDILSLVSNGPFCGHVDGALVFRVNSPGPASSDFTFRIAARITESSVITVSLGRVPRLGFSPMGESLLSEVPRVESPSYVRGERKEGGGIVIREHVLEFLLTMNHSEGGDNPVPRTVSNLVVHIIDTHVDQLQDLVTKLEMELDSVEFEMDKGGFALKKQMLDDRRFPKLHLNLQRLLQVIAHGEQVFPRVKEKCSSKRWFANEDIISLEELIGRLRRLKENVGFIANRVTAIQAGLDSWQAEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQRDPALKNGFRNVMLLCVMMLFLVLLCFAFPAIYARIASWRRRRALRRSWSLNRKSFLKRIPGGSERGGYLRI* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0983 454 Coils Coil 310 330 - -
Vvi3g0983 454 MobiDBLite consensus disorder prediction 1 36 - -
Vvi3g0983 454 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 345 409 IPR045863 -
Vvi3g0983 454 SUPERFAMILY CorA soluble domain-like 43 335 IPR045861 -
Vvi3g0983 454 Coils Coil 230 250 - -
Vvi3g0983 454 Gene3D Magnesium transport protein CorA, transmembrane region 215 341 - -
Vvi3g0983 454 Gene3D Magnesium transport protein CorA, transmembrane region 342 415 - -
Vvi3g0983 454 PANTHER OS08G0130000 PROTEIN 2 454 - -
Vvi3g0983 454 Pfam CorA-like Mg2+ transporter protein 213 411 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0983 - - vvi:100256074 865.144