Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0982 ATGGGGACCTTAGAAGCACAAACACCCTACTCCACCGCTGAAAGATCCATCAGTGCCACCGACGGCGATGAAGACGAGCTCTCGCCCATCGAGGAAGTCCGGCTAACCGTGACCAACACCGACGACCCCAGCCTCCCCGTGTGGACCTTTAGAATGTGGTTCATGGGCTTGTTCTCATGCGCACTCCTCTCATTTCTCGACCAATTCTTCGCGTACAGGACTGAGCCGCTCATCATAACTCAGATCACCGTCCAAGTTGCCACCCTCCCCATTGGCCACTTCATGGCGGCGGTGCTACCCACCACCAGGTTCCGGATTCCAGGGTTCGGGTCACGATCATTTTCGCTCAACCCTGGTCCGTTTAACATGAAGGAACATGTCCTCATTTCCATCTTTGCTAACGCCGGAAGTGCTTTTGGAAGTGGCTCTGCTTATGCTGTTGGTATAGTCACCATAATCAAAGCCTTTTATCAACGAAAGATCTCGTTTTTGTCTGGTTGGCTTCTCATAATCACTACTCAGGTATTGGGATATGGATGGGCTGGGCTGCTGAGGAAGTATGTGGTGGAGCCGGCCCATATGTGGTGGCCCAGCTCCTTGGTTCAAGTCTCTCTTTTCCGGGCATTACATGAGAAAGAGGAGCAACGCATGACAAGAGCAAAGTTCTTCGTGATTGCACTAATTTGCAGTTTTTCCTGGTACCTGATCCCAGGATACCTCTTCTCAACACTCACAAGTATATCATGGGTCTGCTGGGCATTCCCCAAGTCAGTTACAGCCCAGCAATTAGGCTCAGGCATGAGGGGCCTTGGACTTGGAGCCCTAACCCTCGACTGGACTGTTGTGGCCTCTTTCTTATTCAGCCCCCTCGTTTCCCCTTTCTTTGCCATTCTCAATATCTTTGTGGGCTATGTCTTGTTAGTATATGCTGTCATTCCCTTGGCTTACTGGGGATTTGATATGTACAATGCACATAGATTTCCCATATTCTCCTCTCACTTGTTCACATCGCAAGGTCAGCTATATGACATAGGAGCTATTGTAAATGACAAGTTTGAGATAAATCGACAGAAGTATGAGGAGCAGGGACGAATTAATCTAAGCATATTTTTTGCTCTCAGTTATGGCTTTGGTTTTGCAACTATAGCATCCACCCTTACTCATGTCGCTCTCTTCTATGGAAGCGAAATTTGCCAGCGGTATCGTGCTTCTTACAAGGGCAAGGAGGATATCCATACAAGATTGATGAGGAGATATGCAGACATACCTTCCTGGTGGTTCTATTTGTTACTTGTAGTGACAATCGCAGTCTCCCTTGCACTCTGCATCTTCTTGAATGATGAGGTTCAGATGCCATGGTGGGGACTCATCTTTGCTGCTGCCATGGCATTTATTTTTACCCTTCCAATCAGCATTATAACTGCTACAACAAACCAGACACCAGGACTGAATATAATCACAGAGTACGTCATGGGTGTCATATTACCAGGAAGACCGATAGCCAATGTGTGCTTCAAAACCTATGGTTATATGAGCATGGCTCAGGCTGTCTCCTTCCTGAATGATTTCAAGCTAGGACACTACATGAAGATCCCTCCAAGATCGATGTTCTTAGTTCAGTTTATAGGAACGATCCTGGCAGGAACAATCAACATTGCAGTGGCATGGTGGTTGCTGACTACTATTAAGAACATATGCCAGGATGAACTCCTTCCTCCTGACAGTCCTTGGACATGCCCTGGTGACCGGGTCTTCTTTGATGCATCTGTTATATGGGGTTTGGTAGGACCTAAACGAATCTTTGGAAGTCTTGGAAACTATCCTTCCATGAATTGGTTCTTTCTTGGAGGTGCATTGGGACCGGTTGTGGTTTGGGTATTTCATAAGGCATTCCCAAAGCAATCTTGGATTCCCCTAATTAACCTTCCAGTCCTTTTGGGAGCAACAAGTATGATGCCACCGGCAACCTCACTAAATTACAATTCTTGGATTCTTGTTGGAACAATTTTCAACTTTTTTGTCTTCCGTTATCGAAAGCAGTGGTGGCAGAGGTACAATTATATCCTTTCAGCTGCTATGGATGCGGGGGTTGCTTTCATGGCAGTGCTATTGTACTTCTCACTGGGCATTGAGGAGAAAGGTCTCACTTGGTGGGGTACAGATGGTGAACACTGTAAGCTGGCAACTTGTCCTACAGCCAAAGGCATTGTGGTTGATGGCTGTCCAGTGAACTAA 2235 0.4685 MGTLEAQTPYSTAERSISATDGDEDELSPIEEVRLTVTNTDDPSLPVWTFRMWFMGLFSCALLSFLDQFFAYRTEPLIITQITVQVATLPIGHFMAAVLPTTRFRIPGFGSRSFSLNPGPFNMKEHVLISIFANAGSAFGSGSAYAVGIVTIIKAFYQRKISFLSGWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPSSLVQVSLFRALHEKEEQRMTRAKFFVIALICSFSWYLIPGYLFSTLTSISWVCWAFPKSVTAQQLGSGMRGLGLGALTLDWTVVASFLFSPLVSPFFAILNIFVGYVLLVYAVIPLAYWGFDMYNAHRFPIFSSHLFTSQGQLYDIGAIVNDKFEINRQKYEEQGRINLSIFFALSYGFGFATIASTLTHVALFYGSEICQRYRASYKGKEDIHTRLMRRYADIPSWWFYLLLVVTIAVSLALCIFLNDEVQMPWWGLIFAAAMAFIFTLPISIITATTNQTPGLNIITEYVMGVILPGRPIANVCFKTYGYMSMAQAVSFLNDFKLGHYMKIPPRSMFLVQFIGTILAGTINIAVAWWLLTTIKNICQDELLPPDSPWTCPGDRVFFDASVIWGLVGPKRIFGSLGNYPSMNWFFLGGALGPVVVWVFHKAFPKQSWIPLINLPVLLGATSMMPPATSLNYNSWILVGTIFNFFVFRYRKQWWQRYNYILSAAMDAGVAFMAVLLYFSLGIEEKGLTWWGTDGEHCKLATCPTAKGIVVDGCPVN* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0982 744 MobiDBLite consensus disorder prediction 1 26 - -
Vvi3g0982 744 Pfam OPT oligopeptide transporter protein 48 707 IPR004813 GO:0035673
Vvi3g0982 744 PANTHER ISP4 LIKE PROTEIN 21 743 IPR004648 GO:0055085
Vvi3g0982 744 MobiDBLite consensus disorder prediction 1 17 - -
Vvi3g0982 744 NCBIfam small oligopeptide transporter, OPT family 27 710 IPR004648 GO:0055085
Vvi3g0982 744 NCBIfam OPT family oligopeptide transporter 31 709 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0982 Vvi-Chr3 10825633 10834213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0982 18 744 Organic Solute Cotransporters AT5G64410 84.044 0.0 1303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0982 - - vvi:100250922 1517.67