Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0980 ATGGGTGTTATGAATGTTCTCAAATTCTCAGCTGCATGCTTTGATCTTCTTGGCTGGCCTCTCTTTGCACTGGGTTATCCTCTATGTTCTTCAATTTGGGTAATTGAGACTAACTCAATCTCAGACTTTCGGAAGTTGGTGACGTATTGGGTTCTATTTTCCTTGATTTCACTCTTTGATCATGCTTTTGCCAAGCTCCTTGAATGGATACCATTCTGGCCTTACATAAAGCTGATGATCATCTGCTGCCTGGTGATGCCTCATTTTGATGGTTCATATTATGTCTATCAACACCTTGTTCATCCATGCTTGTCCATGGTCACACAAGTTGTCATGAATTGGCTCTTCAATGAATCAAAAAAGTTGTCTCCTAGCAGAGAAAACTTTCTTGTTGCAGCAGATCAATATATTAAAGAGAATGGAGCTGAAGCTTTGGAGAAACTCCTTGCTAGTAAGTGGCAGTGTGAAGAGCTCAATGTTGCTCAAAAGGAGATCCGAGTAGTTGAAGTAACAGAGATAAAAAATAGGGATGGAGCAAAGCAGTGTGAAGGTCCTAATGTTGCTAAGGAGGAGATCAAAGTGACAAAAGTAGCACAGAGAACATTTGGTGGTACGGCAAAGTGGGTTAAACGAACAGAGTTAAATCTTGGTGAAACTAAAAGTACTACAACCTGTGCTGAGGAGATAGCAGAAAGGCCAGCTGGACTGTTGAATTCCCATCTTCAAGGGGAGAGACATAAGGCCACTTCTGAGCAGCTGAATGCCAAAAACCAGGCAACCAAAACCAATGGTTCCCCATCTGCTTCAGTGGAAAACAAATCTGATCAGACCAAAAACAATGGAATCTCAGCTTCTTCGACAGTGAAGAGACCCGGTGAACAACACAAGTGTGCATCTAGCAATGGACTGGAGCAGAAGAATAACAAAATCAGGAGGAGAAGGCGCTAG 948 0.4241 MGVMNVLKFSAACFDLLGWPLFALGYPLCSSIWVIETNSISDFRKLVTYWVLFSLISLFDHAFAKLLEWIPFWPYIKLMIICCLVMPHFDGSYYVYQHLVHPCLSMVTQVVMNWLFNESKKLSPSRENFLVAADQYIKENGAEALEKLLASKWQCEELNVAQKEIRVVEVTEIKNRDGAKQCEGPNVAKEEIKVTKVAQRTFGGTAKWVKRTELNLGETKSTTTCAEEIAERPAGLLNSHLQGERHKATSEQLNAKNQATKTNGSPSASVENKSDQTKNNGISASSTVKRPGEQHKCASSNGLEQKNNKIRRRRR* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0980 315 MobiDBLite consensus disorder prediction 252 305 - -
Vvi3g0980 315 Pfam TB2/DP1, HVA22 family 27 103 IPR004345 -
Vvi3g0980 315 PANTHER HVA22-LIKE PROTEINS 7 139 IPR004345 -
Vvi3g0980 315 MobiDBLite consensus disorder prediction 242 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0980 Vvi-Chr3 10713234 10717087 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0980 - - vvi:100267951 628.246