Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0962 ATGATGCTTTTAGGATGCCAATGGAAGGTTGACAGGTGGCATGAGGATCTGCAGGCCGTTGTATTGAGGAGCACGCTGGAAGTTGCAGGGCATGCCTTTGGCTTGGAGGTTATAGAGAGAGCCAGAAAGAAAGGGTCTCTAACATTTTTCTTCCCGAAAGTTTATGAGATAAGTGACCTTGGAGGTAAGCCATGGACAATGGTGCAAAAGAGAGGGAACCGATTTGTGGTTAATGCTAAACTCTTTTATGTGAACGGGTTCAACACTTACTGGTTGATGGAATTTGCCGTGAATCAATCCACAAAGGGGAAGGTCAGTGAGGTGTTTTAA 330 0.4515 MMLLGCQWKVDRWHEDLQAVVLRSTLEVAGHAFGLEVIERARKKGSLTFFFPKVYEISDLGGKPWTMVQKRGNRFVVNAKLFYVNGFNTYWLMEFAVNQSTKGKVSEVF* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0962 109 PANTHER - 31 109 IPR045053 GO:0004553
Vvi3g0962 109 Gene3D Glycosidases 66 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0962 Vvi-Chr3 10119674 10120403 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0962 60 109 Glycoside Hydrolase AT5G01930 56.000 3.84e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0962 K19355 - vvi:100248160 100.138