Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0932 ATGATTTATCAGTGGGTATTGGGAGGAATTGTTGCTTCTTTGTTGGGGTTTCTTCTTCTGGACCGTTCAAGAGGGAAGAGGGTGAAGAGCAGAGCAGGAGGACATTTAATGGAGAAAATGAAGGATGAGTGTGTCAAGAGCTCTGCAAATGGAGAATGCTGCTCGGGTTTCGATGGCGGTACCGATGTGATTGTTGTTGGAGCTGGGGTTGCTGGGTCTGCTCTGGCTCACACTCTTGGCAAGGATGGGCGAAGAGTTCATGTGATTGAAAGAGACTTGAGCCAGCCTGACAGAATTGTGGGTGAACTGCTACAACCAGGAGGCTATCTAAAATTGATTGAGTTGGGTCTTGAGGATTGTTTAAATGAGATTGATGCTCAGAGGGTCCTTGGATATGCTCTTTACAAGGATGGGAAAAATGCTAGGCTCTCTTATCCCTTGGAACAGTTTCACTCGGATGTGGCTGGGAGAAGCTTTCACAATGGACGATTTGTCCAGAGGATGCGTGAGAAGGCTGCATCGCTTCCCAATGTAAAAATGGAACAAGGAACGGTGACATCTCTGATTGAAGAAAAAGGGTCTATCAAAGGAGTGCAATACAGGACCAAGGCTGGTGAAGAACTGAAAGCATATGCTCCCCTTACAATTGTATGCGATGGTTGTTTTTCAAATTTACGACGCTCTCTTTGCAACCCTAAGGTGGATGTGCCCTCTTGTTTTGTTGGTTTAGTCCTCGAGAACTGTCAGCTCCCACATGCAAATCATGGACACGTTATTCTGGCAGACCCTTCACCCATCTTGTTTTATCCGATTAGTAGCAATGAGATTCGCTGTTTGGTTGATGTACCTGGCCAGAAAGTACCTTCAATTGCTAATGGTGAAATGGCCTGCTATTTGAAAACAGTAGTGGCTCCTCAGATCCCCCCTGAGCTGCATAATGCCTTCATATCCGCAATTGATAAGGGGAATGTGAAAACAATGCCAAATCGAAGTATGCCAGCCTCTCCCTATCCCACTCCAGGTGCGCTTTTGATGGGAGATGCATTCAACATGCGGCATCCTTTAACTGGAGGTGGAATGACTGTGGCGCTCTCTGATATTGTTGTTCTGCGAGATCTTCTTAAACCTCTGCAAAATCTAAATGATGCAGCTGCTCTTTGCAAATATCTTGAAGCCTTTTACACTCTACCCAGTGGCATCCACAATAAACACATTGGCCGGAGCCCTATATAA 1233 0.4582 MIYQWVLGGIVASLLGFLLLDRSRGKRVKSRAGGHLMEKMKDECVKSSANGECCSGFDGGTDVIVVGAGVAGSALAHTLGKDGRRVHVIERDLSQPDRIVGELLQPGGYLKLIELGLEDCLNEIDAQRVLGYALYKDGKNARLSYPLEQFHSDVAGRSFHNGRFVQRMREKAASLPNVKMEQGTVTSLIEEKGSIKGVQYRTKAGEELKAYAPLTIVCDGCFSNLRRSLCNPKVDVPSCFVGLVLENCQLPHANHGHVILADPSPILFYPISSNEIRCLVDVPGQKVPSIANGEMACYLKTVVAPQIPPELHNAFISAIDKGNVKTMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRDLLKPLQNLNDAAALCKYLEAFYTLPSGIHNKHIGRSPI* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0932 410 SUPERFAMILY FAD/NAD(P)-binding domain 61 393 IPR036188 -
Vvi3g0932 410 Gene3D - 60 405 IPR036188 -
Vvi3g0932 410 FunFam Squalene monooxygenase 2 55 403 - -
Vvi3g0932 410 Pfam NAD(P)-binding Rossmann-like domain 65 91 - -
Vvi3g0932 410 PANTHER SQUALENE MONOOXYGENASE 8 396 IPR040125 GO:0004506|GO:0016126
Vvi3g0932 410 Pfam Squalene epoxidase 212 395 IPR013698 GO:0004506|GO:0016020|GO:0050660
Vvi3g0932 410 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 62 84 - -
Vvi3g0932 410 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 354 - -
Vvi3g0932 410 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 354 370 - -
Vvi3g0932 410 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 211 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0932 Vvi-Chr3 9395125 9397857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0932 7 396 Miscellaneous Gene Families AT2G22830 73.333 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0932 K00511 - vvi:100265235 792.727