Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0919 ATGGCGGTGGAGTATCGTTGTTGTGAAGCGGAATTCTTCATACACATACTGATAATTGTCGGTTTGGTTTTGTTTGCTGGCTTGATGTCTGGACTCACTCTGGGGCTCATGTCCATGAGTTTGGTTGATCTTGAGGTTCTTGCCAAATCTGGAACTCCCAAGGATCGGAAACATGCTGAAAAGATATTGCCTGTTGTCAAGAAGCAGCATTTGCTGCTTTGCACGTTGCTTATCTTCAATGCTGCTGCCATGGAGGCTCTTCCTATTTTTCTTGACGGCCTGATCACTGCTTGGGGTGCTATTTTGATTTCAGTGACATTGATACTTCTGTTTGGTGAGATAATACCTCAATCGGTTTGTTCTCGATATGGTTTGGCAATTGGTGCAACAGTGGCTCCTGTGGTCCGCATTCTTGTTTGGATCTGCTATCCTGTTGCATATCCAATAAGCAAGCTATTAGACTTTCTACTGGGACATGGACATGTAGCCCTTTTCCGTAGAGCTGAGTTGAAAACACTTGTTGATTTTCATGGTAATGAGGCTGGAAAAGGTGGAGAGCTGACACATGACGAGACAACAATCATTGCTGGAGCACTTGAGCTCAGTGAGAAAACAGCTAGTGATGCCATGTCTCCTATATCTGATACTTTCGCAATTGATATCAATGCCAAGCTTGATAGGGATCTGATGAATCTAATCTTGGAGAAGGGGCATAGCAGAGTGCCAGTGTACTATGAGCAGCCCACAAATATCATTGGACTTATTCTGGTGAAGAATTTGTTAACCATTCATCCAGAAGACGAAATACCTGTAAAGAATGTCACTATCCGCAGGATTCCAAGGGTTCAAGAAACTTTGCCATTATATGACATATTGAACGAATTTCAGAAAGGTCACAGCCATATGGCTGTTGTTGTAAGACAGTGCAACAAAATGGAGGAGCAGTCTTCCAACAAGAGCCCTGCTGATAATTCAGTGAAAGACGTGAAGGTGGATATTGATGGTGAAAAACCTGCTTCTGCACAAGAAAAAAGTTTAAAGAACAAGAGAGGACTCCAGAAGTGGAAGAGTTTTCCCAACAGTGCAAATAATTCATACCGAAGTGGCACCCCGAGGAGTAAGAAATGGGCTAGGGACATATACTCAGACATCCTGCAGATAGATGGCAGTCCACTGTCGAAACTAGCTGGAGAAGAAGAGGCCGTTGGCATCATAACAATGGAAGATGTCATTGAAGAGCTTTTACAGGAGGAGATCTTTGATGAGACGGATCATCATTTTGAAGACTCATAA 1293 0.4316 MAVEYRCCEAEFFIHILIIVGLVLFAGLMSGLTLGLMSMSLVDLEVLAKSGTPKDRKHAEKILPVVKKQHLLLCTLLIFNAAAMEALPIFLDGLITAWGAILISVTLILLFGEIIPQSVCSRYGLAIGATVAPVVRILVWICYPVAYPISKLLDFLLGHGHVALFRRAELKTLVDFHGNEAGKGGELTHDETTIIAGALELSEKTASDAMSPISDTFAIDINAKLDRDLMNLILEKGHSRVPVYYEQPTNIIGLILVKNLLTIHPEDEIPVKNVTIRRIPRVQETLPLYDILNEFQKGHSHMAVVVRQCNKMEEQSSNKSPADNSVKDVKVDIDGEKPASAQEKSLKNKRGLQKWKSFPNSANNSYRSGTPRSKKWARDIYSDILQIDGSPLSKLAGEEEAVGIITMEDVIEELLQEEIFDETDHHFEDS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0919 430 PANTHER METAL TRANSPORTER CNNM 3 427 IPR045095 GO:0010960
Vvi3g0919 430 FunFam DUF21 domain-containing protein 189 324 - -
Vvi3g0919 430 Gene3D - 191 323 IPR046342 -
Vvi3g0919 430 ProSiteProfiles CBS domain profile. 210 271 IPR000644 -
Vvi3g0919 430 Pfam Cyclin M transmembrane N-terminal domain 17 189 IPR002550 -
Vvi3g0919 430 Gene3D - 389 422 IPR046342 -
Vvi3g0919 430 SUPERFAMILY CBS-domain pair 194 416 IPR046342 -
Vvi3g0919 430 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Vvi3g0919 430 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0919 Vvi-Chr3 9216205 9223052 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0919 K16302 - vvi:100261788 836.639