LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vvi3g0915	ATGCCCATCAGAGGTCACTCCCTCCATCATGCGAAGAAGAGCGCTTCTCACTCCTCCTCCTGCTCCACGTCTCTGCTCTTCATCTCTCTCCTCTGCCTCGCCTCTCTCTTCCTCGTCTACTCTCTCTTCAAATCCTCTGTTTCTCCTCATAACCACCAAAACCTCCAATTCAAACGTAGCGATTCCTCTGGAACTCCGATCTTGGTTGAGCCGTGCGATTATTCGGATGGGATGTGGATCTATGATCCCAGTGTGAGATCTGCGCCTTATGATCACACATGTAAGGAGATTTTCAAGGGATGGAATTGCATTGCCAGTAATAAATCCAATGGTTTGGATATTATCAAGTGGCATTGGAAGCCCAAAGGCTGTGATCTTCCTCGGTTTGATCCGGTTCGGTTTTTGGAGCGGTTCAGGAACACCAACGTTGAGGCTTGCTTCACTCCTATCTCATGTAGGTGGTCTGCTGATGCTAATGGTGGCACATTAGAATCTCTTGGATATAAAGAGGGTTTTCGAGTTGATGTCGATATCCCAGATGGTACATGGGCAGAGGCTCCAAGCTTCCATGATATTCTTATCTTTAACACAGGACACTGGTGGTGGGCTCCTTCAAAGTTTGACCCTGTGAAGTCACCCATGCTTTTCTTTGAGAACGGTCTGCCTTTGATTCCTGCTCTACCTCCCCATGTTGGCCTTGATTTGGTTTTGAAACACATGATCTCATTTGTGGAGAGAAGAATGCGAACCGGTGGGATCAAGTTCTTCCGCACACAATCCCCAAGACATTTTGAAGGAGGTGATTGGGACCAAGGTGGTTTTTGTCAGCACCTACAGCCTTTGTTGCCAGAACAAGTTGAAGAACTCTTCTCTTTGGAGAACAATGGAACAAATGTGGAGACACGCCTTGTGAACCAGCACCTATACAAGGCCCTGCAAGGCTCTGATTTCCATATTTTGGAGATAACCCGGATGAGTGAGTTTAGAGCAGATGCCCATCCCTCCACAGCTGGTGGAAAGAAGCATGACGATTGCATGCACTGGTGCCTACCAGGAACTACGGATACTTGGAATGACTTGTTCATAACACATCTAAACAATATCAAGTTTCAAAACTGA	1119	0.4683	MPIRGHSLHHAKKSASHSSSCSTSLLFISLLCLASLFLVYSLFKSSVSPHNHQNLQFKRSDSSGTPILVEPCDYSDGMWIYDPSVRSAPYDHTCKEIFKGWNCIASNKSNGLDIIKWHWKPKGCDLPRFDPVRFLERFRNTNVEACFTPISCRWSADANGGTLESLGYKEGFRVDVDIPDGTWAEAPSFHDILIFNTGHWWWAPSKFDPVKSPMLFFENGLPLIPALPPHVGLDLVLKHMISFVERRMRTGGIKFFRTQSPRHFEGGDWDQGGFCQHLQPLLPEQVEELFSLENNGTNVETRLVNQHLYKALQGSDFHILEITRMSEFRADAHPSTAGGKKHDDCMHWCLPGTTDTWNDLFITHLNNIKFQN*	373

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vvi3g0915	372	PANTHER	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	41	143	IPR029962	GO:0016413
	Vvi3g0915	372	Pfam	GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p	143	363	IPR026057	GO:0016740
	Vvi3g0915	372	Pfam	PMR5 N terminal Domain	71	125	IPR025846	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vvi3g0915	Vvi-Chr3	9153387	9162396	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vvi3g0915	-		-	vvi:100256594	639.417