Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0911 ATGGGGTTTCACAAGTTTCTCTTAGCCATTTACATCTTTGGTTCAGCCTTGGCTCATTTCTCACTAGCTCAGAGCTCCCCCCAGGACTATGTGGACGCCCACAACGCTGCACGGGCACAGGTAGGAGTGCAGCCCATCACATGGAATGAGACAGTGGCAGCTTACGCCAGGAGATATGCTAGCAGCCGGGTTGCTGAGCAGTGCAGCATGGAGCATTCAGGAGGGCCTTACGGAGAGAACCTTGCTGAAGGGTATGGTTCAATGTCAGGTTCAGATGCAGTGGAGTTTTGGCTGACTGAGAAGCCAAACTATGACCACAACTCCAACTCGTGTGTTGGTGGAGAGTGCCTGCACTATACTCAGATTGTTTGGGGTGGCTCACTTCATCTTGGGTGTGCTAGGGTTCAGTGCAAAAATGGGTGGTGGTTCATCACCTCCTTGGTTCACACCTCCTGTGCTCAAAACTCACAGCAGGACTACCTCAATGCTCACAATACTGCTCGGGCACAAGTTGGTGTTGGGTCTATGACATGGAACAACACCGTAGCCTCTTATGCTCAGAACTATGCCAACCAGCGGATCGGGGACTGCAATCTCGTGCATTCGAATGGGCCTTATGGGGAGAACATTGCCTGGGGCAGCGGTTCATTGACAGGCACTGATGCGGTGAACCTGTGGGTGGGGGAGAAGCCTAATTATGACTACAACTCCAACTCATGCGTTGGTGGGAAATGCGGGCACTATACTCAAGTTGTTTGGCGCAACTCAGTGCGCCTTGGGTGCGCTAGGGTTCAATGCAACAATGGAGGGTGGTTCGTCACATGCAACTACGATCCACCGGGCAACTATGTCGGACAGCGTCCTTATTGA 870 0.5241 MGFHKFLLAIYIFGSALAHFSLAQSSPQDYVDAHNAARAQVGVQPITWNETVAAYARRYASSRVAEQCSMEHSGGPYGENLAEGYGSMSGSDAVEFWLTEKPNYDHNSNSCVGGECLHYTQIVWGGSLHLGCARVQCKNGWWFITSLVHTSCAQNSQQDYLNAHNTARAQVGVGSMTWNNTVASYAQNYANQRIGDCNLVHSNGPYGENIAWGSGSLTGTDAVNLWVGEKPNYDYNSNSCVGGKCGHYTQVVWRNSVRLGCARVQCNNGGWFVTCNYDPPGNYVGQRPY* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0911 289 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 158 286 IPR001283 -
Vvi3g0911 289 CDD CAP_PR-1 157 289 - -
Vvi3g0911 289 ProSitePatterns CRISP family signature 1. 246 256 IPR018244 GO:0005576
Vvi3g0911 289 FunFam Putative pathogenesis-related protein 1 154 289 - -
Vvi3g0911 289 Gene3D CAP 25 148 IPR035940 -
Vvi3g0911 289 Gene3D CAP 149 289 IPR035940 -
Vvi3g0911 289 ProSitePatterns CRISP family signature 2. 272 283 IPR018244 GO:0005576
Vvi3g0911 289 FunFam CAP, cysteine-rich secretory protein, antigen 5 24 152 - -
Vvi3g0911 289 SUPERFAMILY PR-1-like 25 145 IPR035940 -
Vvi3g0911 289 SUPERFAMILY PR-1-like 154 289 IPR035940 -
Vvi3g0911 289 PRINTS Allergen V5/Tpx-1 family signature 176 194 IPR001283 -
Vvi3g0911 289 PRINTS Allergen V5/Tpx-1 family signature 245 261 IPR001283 -
Vvi3g0911 289 PRINTS Allergen V5/Tpx-1 family signature 272 285 IPR001283 -
Vvi3g0911 289 PRINTS Allergen V5/Tpx-1 family signature 222 235 IPR001283 -
Vvi3g0911 289 SMART SCP_3 25 145 IPR014044 -
Vvi3g0911 289 SMART SCP_3 155 285 IPR014044 -
Vvi3g0911 289 Pfam Cysteine-rich secretory protein family 161 277 IPR014044 -
Vvi3g0911 289 Pfam Cysteine-rich secretory protein family 31 142 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0911 Vvi-Chr3 9120045 9130663 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0911 K13449 - zju:107413742 378.637