Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0910 ATGGGGTTGTGTAAGAATATTTCAGTAGCACTTGCTTGTCTCATGGGCTTAGCCTTGGTTCACACCTCCTATGCCCAAAACTCACAACAGGACTACCTCAATGCTCACAATACTAATCAGGCACAATTTGGCGTTCGGTCTATGACATGGAACAACACCATAGCCTCCTATGCTCAGAACTATGCCAACAAATGGATCGGGGACTGCAATCTCAGGCATTCGAATGGGTCTTCTGGGGAGAACTTTGCCAAGGGCAGTGCCGTGAGGGCCTCTTTGGTCCAAAGCGAACAATATCTACACAGTTGGGAATGGGTTGTTACAAATGGTATCAGAGCCGATCCTCGACCCTGGTGTAGGGGTTTGTTTAGCCCCGTAAGGGGTGTTTGTTTGTTTGACCCCGCAATCCCATGGGACACAACGAGGACGTTGTGTCTGCATGGGGAAGAGGGGGGGCTGTTTGTGATGTCCCACATCGGATAG 480 0.5 MGLCKNISVALACLMGLALVHTSYAQNSQQDYLNAHNTNQAQFGVRSMTWNNTIASYAQNYANKWIGDCNLRHSNGSSGENFAKGSAVRASLVQSEQYLHSWEWVVTNGIRADPRPWCRGLFSPVRGVCLFDPAIPWDTTRTLCLHGEEGGLFVMSHIG* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0910 159 SMART SCP_3 27 139 IPR014044 -
Vvi3g0910 159 SUPERFAMILY PR-1-like 15 102 IPR035940 -
Vvi3g0910 159 Gene3D CAP 21 110 IPR035940 -
Vvi3g0910 159 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 30 102 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0910 Vvi-Chr3 9106967 9110222 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0910 K13449 - vvi:100242451 134.806