Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0907 ATGGATTATAGTTGGGGTCGAGCCATCTATGGTGAGCAGTTGTATCTCTGGGATCCTAACTCCAGAAATCTAACTGATTTAACTACCAACTTCTCCTTTGTCATTGATTCACTTAACAGCAGTTCATATGCTGATGGCCTCACCTTCTTCCTTAACGACACCCAATTGCCTTCACGTGTGTGGGGAGAAAACATCGGTCTCACGGAGTTTAACGTGACAAATACAACTGCAATTCATTTTGTCGTAGTGGAGTTTGATACATTTTCGAACACGGGAAAAAGGGATCCGGTGAGTGATCATGTTGGAATTGATATTAACTCCATGATATCTGTCAAAACAGTGAACTGGTCCAGCAATATAAAGGAAGGAAAGCTAAATCATGTTTCCATCTGTTATACTTCTAGTTCACAAAATCTGAGTGTTGTTCTAATCACTGAGTTTATGGGCGATCGAACTACCTCCCAAAGCCTCTACTACAAAGTTGATCTGAGAGAATACTTGCCAGAATTCGTTAATATTGGCTTCTCAGGAGCAACAGGAAGAGCATTCCAGAAAAACAACATTCACTCATGGAATTTCAGTTCAACTTTGCAACCTCCTAGTCCTGTAGAACCAGGAGATGGAAAGAATGGAAAGAAAACAGGATTTGTGGTGGGATTGAGTGTTTGTGCAGTTGTTGTAGTATGTGGGTTGGGATTGGTTTGGCATCACTTGCGGAAGAAGAGGAATAGTGGGGGAGAAGATGATACTGACTCTGACCCAACCATGGACGAAGACTTTGAAAAGGGTATTGGACTTGGGAAATTTTCCTTCCAAGAATTGGCTCTTGCAACCAGTAACTTTGCAGAGGAGGAAAAGCTTGGAGAGGGAGGGTTCGGTGGGGTCTATAGAGGCTTCTTAAGGAAACTGAACTCTTACGTTGTAATTAAGAGAGTATCAAGGGGGTCCATGATTACTACTCAAAAAGTGCTATTTGATAGCCTTTAA 987 0.4184 MDYSWGRAIYGEQLYLWDPNSRNLTDLTTNFSFVIDSLNSSSYADGLTFFLNDTQLPSRVWGENIGLTEFNVTNTTAIHFVVVEFDTFSNTGKRDPVSDHVGIDINSMISVKTVNWSSNIKEGKLNHVSICYTSSSQNLSVVLITEFMGDRTTSQSLYYKVDLREYLPEFVNIGFSGATGRAFQKNNIHSWNFSSTLQPPSPVEPGDGKNGKKTGFVVGLSVCAVVVVCGLGLVWHHLRKKRNSGGEDDTDSDPTMDEDFEKGIGLGKFSFQELALATSNFAEEEKLGEGGFGGVYRGFLRKLNSYVVIKRVSRGSMITTQKVLFDSL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0907 328 ProSitePatterns Legume lectins alpha-chain signature. 167 176 IPR000985 -
Vvi3g0907 328 ProSitePatterns Protein kinases ATP-binding region signature. 287 310 IPR017441 GO:0005524
Vvi3g0907 328 Pfam Legume lectin domain 3 201 IPR001220 GO:0030246
Vvi3g0907 328 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 3 243 - -
Vvi3g0907 328 CDD lectin_legume_LecRK_Arcelin_ConA 1 197 IPR001220 GO:0030246
Vvi3g0907 328 FunFam L-type lectin-domain containing receptor kinase V.9 1 204 - -
Vvi3g0907 328 Gene3D - 1 200 - -
Vvi3g0907 328 SUPERFAMILY Concanavalin A-like lectins/glucanases 3 199 IPR013320 -
Vvi3g0907 328 Gene3D Phosphorylase Kinase; domain 1 266 326 - -
Vvi3g0907 328 SUPERFAMILY Protein kinase-like (PK-like) 267 316 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0907 Vvi-Chr3 9080159 9081145 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi3g0907 1 316 Receptor kinase-like Gene Family AT5G10530 38.226 2.93e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0907 - - vvi:100244573 482.641