Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0899 ATGAAATTACTTATAAAAAAAAGGGTGACTAAGGGACCTTTGAATGATAAGAACATTGTAACTGAAATTCTTCCAGCAAAGAGGTTTTACAGAACAGAGGAGTACCATCAGCAATATTTGGAAAATGGTGGAGGTAAAGGCTTATGCCAGTTTGCTGAAAAGGGTTGCACTGACCCCATCAGATGCTATGGTTGA 195 0.3846 MKLLIKKRVTKGPLNDKNIVTEILPAKRFYRTEEYHQQYLENGGGKGLCQFAEKGCTDPIRCYG* 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0899 64 Pfam Peptide methionine sulfoxide reductase 7 45 IPR002569 GO:0008113
Vvi3g0899 64 Gene3D Peptide methionine sulphoxide reductase MsrA 2 64 IPR036509 GO:0008113
Vvi3g0899 64 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 10 63 - -
Vvi3g0899 64 SUPERFAMILY Peptide methionine sulfoxide reductase 6 56 IPR036509 GO:0008113
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0899 Vvi-Chr3 8927396 8927983 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0899 K07304 - vvi:100255310 102.449