Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0889 ATGGATCCCTGCCCTTTCCTTCGGATCCTTGTGGGAAATCTAGCTCTCAAGTCTCCTGCTCTGATCCCCTCCAAGTCTGCCTTCTCGCTTGTTCATCCTTCTTCTTCTCCCTTCTTTTGCAAGATCAAGCTCGGAAATTTCCCCTCGCAGTTCGCTACGGTTCCCTTGGTTCCACAAGAGACTCACACTTCGGATGACGTCGTTTCCTTCACTTTGACTCGGAAGGATATCGAAAAGCTGGGGGAGAAGAGCCTTTTCTCCACTAAGGAGCCGCGTTTACAGATTCTGGTTTACACTGGGCGGAGAGGGAGGAGTTGTGGGTTCAGCGCTGGGAAGCTGTTGGGTAGAGTCACGGTGGGGTTGGATCTCAAGGGGGCGGTGGGTAGAGCTTGTGTATTTCACAATGGATGGGTCTCCGTCGGCGGCGAGTCCTCTCAGTTGTATTTGAGCGTTCGGGCCGAGCCTGATCCGAGATTTGTGTTTCAGTTTGGGGGGGAACCGGAGTGCAGCCCTCAGGTTTTTCAGATTCAGGGAAACCTCCGGCAGCCGGTGTTTACCTGCAAGTTCAGTTTCAGAAACTCCGGTGACCGAAGCTTGAGATCAAGATCATCGATTTCAGAAGCGAGCACATCGAGAAGCTGGTTCAGTTCTAAAGATGAGGATTCAAAGGAGCGCAAAGGGTGGTCGATAACCATCCACGATCTCTCGGGCTGTCCTGTCGCCGCTGCTTCGATGACGAATCCCTTCGTCCCCTCGCCGGGCTCCGGCCGGGTCAAGCGGTCGAACCCTGGAGCCTGGCTGATCCTCCGGCCGGAAGACGGGACCTGGAAGCCGTGGGGGAGGCTAGAGGCATGGCGGGAGCCGGACGGCCTAGGCCACCGCTTCGAGCTCCTCCCGGACGCAACGGGCGGCCCCGCCGTTCTTCTCGCCAGTTCTACTCTCAGCACCAAAAAAGGCGGGAAATTCACCATTGACTCCAGCTCCAGGAACTTTCCGGCGACGACCCCGAGAGGCGCGTGCGAGTCCGGAACAAGGTCATGGGTGGAATCGGTATACAGAGGGTTCGTGATGTCATCGACGGTGGGCGGAGAGGGGCGGTGCAGCACGCCGGAGGTGGAGGTGGGGGTGAAGCACGTGACGTGCACGGAGGACGCGGCGGCGTTCGTGGCGTTGGCGGCGGCCATGGACCTGAGCATGGACGCCTGCAAGCTGTTTTCACAGAAACTGAGGAAAGAGCTGAGAAGGCAGCAGAGTGAGGAGTTTGTCGTTTGA 1272 0.5778 MDPCPFLRILVGNLALKSPALIPSKSAFSLVHPSSSPFFCKIKLGNFPSQFATVPLVPQETHTSDDVVSFTLTRKDIEKLGEKSLFSTKEPRLQILVYTGRRGRSCGFSAGKLLGRVTVGLDLKGAVGRACVFHNGWVSVGGESSQLYLSVRAEPDPRFVFQFGGEPECSPQVFQIQGNLRQPVFTCKFSFRNSGDRSLRSRSSISEASTSRSWFSSKDEDSKERKGWSITIHDLSGCPVAAASMTNPFVPSPGSGRVKRSNPGAWLILRPEDGTWKPWGRLEAWREPDGLGHRFELLPDATGGPAVLLASSTLSTKKGGKFTIDSSSRNFPATTPRGACESGTRSWVESVYRGFVMSSTVGGEGRCSTPEVEVGVKHVTCTEDAAAFVALAAAMDLSMDACKLFSQKLRKELRRQQSEEFVV* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0889 423 Pfam Protein of unknown function (DUF1005) 1 414 IPR010410 -
Vvi3g0889 423 PANTHER OS08G0163500 PROTEIN 1 417 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0889 Vvi-Chr3 8825672 8827044 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0889 - - vvi:100254836 823.157