Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0884 ATGTATGTAGCACACAGAACACCATGGAACAAAGAAAACTGCAATATGGAAAAATGGATAAAAGTTGCATTCTTTCGAGGGAGAGGACACTCTCTATGCACCCTCACCCAGGAGAATGACACAACAATTTATTATTTGCTTTTACTAGTTTGTCTACTGGGAAGCAATAGGTCTTACAAGCCCAATCCTCGACTAGCTCGAGTGCTAGACATTCTTTTCATTCTGCATGCAGAACATGAGATGAATTGCTCCACAGCTGCAGCCCGACATCTTTCTTCAAGGACCTCTGAACAAGGCTCTTCTAGTACGTATAACTTGCATTGA 324 0.4198 MYVAHRTPWNKENCNMEKWIKVAFFRGRGHSLCTLTQENDTTIYYLLLLVCLLGSNRSYKPNPRLARVLDILFILHAEHEMNCSTAAARHLSSRTSEQGSSSTYNLH* 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0884 107 Pfam Citrate synthase, C-terminal domain 54 96 IPR002020 GO:0006099|GO:0046912
Vvi3g0884 107 Gene3D Citrate Synthase, domain 1 16 103 IPR016142 -
Vvi3g0884 107 SUPERFAMILY Citrate synthase 23 96 IPR036969 GO:0046912
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0884 Vvi-Chr3 8763803 8765911 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0884 K01647 - vvi:100255795 78.9517