Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0879 ATGGCTGTTTCTTCAAACGGGTCTCCCTCACCTTCGCCGGTCACAAGCAGATCAAACCCCAATTCAAGAAACTCAGAAATCAACAATACTCTCCGAAGGAGTTTCAGTGGAAATCCATTCACCAAGCCTTCAATCGTCGCTAACCCGAGAGGCTTTAATCCTGTTACACCTGCTAACAGTCCTTCAGATTTTCCACGAAGATACTCCATTGCAAAAGAAGGTGGTGTTCCTCCACACCAATATGAGAAAGAGAATGAGAAAGATCAGAATGCAAAACCAGTGAGAATCAGATCACCAGCTGTTTCAAAGGGTACAAAGAACTTCATGTCCCCAACTATCTCTGCTGCTTCCAAGATTGCTGCCTCTCCCAAAAAGAAAGTGTTGCTTGAGAGGAACGAACTGATTCGAACTTCATTGTCATCATTTTCAGATGGGAAAAGTCCTCTTAGTCCATTGAATCTCCAGGAAGTGGTTGAAGATTCTGATTCAAAGTCAGCTTCCTCTGATTCAACTATGGTAGATCCCGGAAAAAGGAAGGAATGTCCTGTGGCTCCTTCTCCTTCCAAAGCTTCCAAAGGCGATGAAGTCCTTGATTTTCCGGTGCCTTTGAAATCCAAGAATGACTCTGAATCCTTATCAGAGACCATAACCATGGGATCAGACTGTGTTGGTATTGATGATTGTTCAAAGACCAGGCCTAGTCCTTCTCCTTCATCAACTTCTATTCTGGCACCACTTGATGCTGATCCATCACTTCCTCCCTGTGATCCCTCACTTCCTTCCTATGTTCCCAAAACAAACTATGCTAATCCATCACCTCCTCCCTATGATCCCAAAACAAACTATCTTTCACCCAGGCCTCAGTTCCTTCTCTACAAGCCTAACCCAAGAATTCAAAAGTTACTCAACAAAAAACAAGAGGTCGGCTTGAGGGGATGTAAGCGACTTGAGGATAGCTTTATCTTTGAAAGCCTGTCTGATACTGAAACCCCTGAAGATACCCAATCTGAAGATTCTTCTTCCGTTGAACTGGAAGGACAAAATGAAGAGGTAGAAGAAAGTGAAGCAGCTTTGACAGAAACAGCCCAAGAAGAACCCAATGTGTCTGAACCAAATCCCATTGACATCCGCACTTCTAATGGGAGGGCCCTTGAGGCAAAAGGGGTGTCCAAGTCATATTCCTCTTTCAGATTGAAGCCCATTTTTGTTCTGTTGCTCCTGTTAGTTGGGTGTTTGTGTATACCAATTACTGACTCTCCATTCATTATCTCAGTCATTGATTCCTCTGTCGGCGAAGAGTCAAGCTTCACTAAATTGTATGAACCAGCTGAGCTCGCTGAATTTGCAAGAACAAATTTTGATGGGCTGACTAGAAACTTCAGGCTGTGGTCAGCTAACACAGTGTCTTATTTCTCCAAGATGATTCCCATTGTAAAAGAAACAAATGAATTGGGTTTCTTGCGGTTTGGTAACTTCACAGATTCACAAGTAGATATTGTGGGCGGTGCATACCTTGTGAAGGAAAATCAACAAAATTTGCAGTGGCCTATGAAGGAGCTAGAGGTTGGAATTGTTCAAATGAAAGAGCAGGGTAATATGGTCACTGAAGCATATGAAAAAGTTGAAGAGGCTTCACAAGTTAACCCAGAATTTGAAGAGGCTAAGCTGACTTTGCAAGCTGAAGTAATTGAACCCGATAATTCAGAATTGGAACAGATTCAAGAGGAATATCACGTTGCTTCTCATACTGAGCTTGAGCAGGCCTCACAGGGTAAAACAGAATTAGAAGAAGCAAATCTCCCTCTACAAGCTGAAGTCGCGGAACCCCATAATTCGGAAGTGCAACAGACTGAAGAGGAAAGTAGTGTTGCTTTTCATATTGACCATGAGGCACAACCCCATAATTCGGAAGGGCAACAGACTGAAGAGGAAAGTAGTGTTGCTTTTCATATTGACCATGAGGCACAACCCCATAATTCGGAAGTGCAACAGACTGAAGAAGAAAGTAGTGTTGCTTTTCATATTGACCATGAGGCACAGAGTATCATAGCTGAAAAGGAGCAGGAAGTTCAAGTCTCACAGGTTTCTAAAATTGAGCCTGAAAAAGTGCCTGAAGCTGAGAAACTCCAGGGCGAAAATAAACTGGTTTCCCGTGCTGAAGTTGAAGTGCAGCAGATTGAAGAGGAAAGTAGTGTTGCTTCTCATGTTGGCCCTGAGGCACAGAGTATCATAGCTGAAAACGAACAGGAAGTTCAAGTTCCACAGGTTTCTGAAATCAAGACTGAAGTGCCTCAAGCTGAGAAACTCCACGGAGAAAATAAACTAATTTCCCATACTGAAGTTGAGTCCAGTGGAGCAGTTTTCGAACCTGAAAGCTCAGAATCAGAAGCTTGGACAGCAAATTCACAAAGCTTCAAGGAACTATATCTGTCACTCAAAGAAAAATCCTCTGCTGTTAACGTTTTGGGGATTTCTTTGCTCATTCTAATTCTAACAGTAGCTGCAGCTTTCATATTTCTAAAGCAACAAAAACCTCCTACCCCGAGTCCTGCTGCAATTCCCATGGATCAGTTGCTGGCCAAGAAACTGGCTCCTATCCCTACAGCAAGTGTGGAGAACACTCACCAAGGGCTGTCTTCTAGGAATTGGCCAACCGAAGTTGATATGGTTGGCGAGTCATGTCCATCTGAGATGAGCAGCTTCCAAAGGAGCACATCCTATGGCAAAAGAGGATCAAAGGGGGCAAGTTTTACATCAGAATACTCAATGGGTTCACCATCCTATAACCAAAAAGGATCTAAGGGGGCAAGTGAAGCTCAAAGCCAAGAAAGGGGGCTGAGGAAGAGCAACAAAAGAGAGTCCCTTGCTTCGTCATCAGAATACTCAACGGGTTCACCATCTTATGGGAGTTTTACATCATATGAGAAAATTCACATTAAGCATGGATGTGGAGATGAAGAGGTGGTGACTCCAGTTAGGAGATCAAGCAGAATCAGAAACCAGGTTTCTTCTCCATGA 3018 0.4341 MAVSSNGSPSPSPVTSRSNPNSRNSEINNTLRRSFSGNPFTKPSIVANPRGFNPVTPANSPSDFPRRYSIAKEGGVPPHQYEKENEKDQNAKPVRIRSPAVSKGTKNFMSPTISAASKIAASPKKKVLLERNELIRTSLSSFSDGKSPLSPLNLQEVVEDSDSKSASSDSTMVDPGKRKECPVAPSPSKASKGDEVLDFPVPLKSKNDSESLSETITMGSDCVGIDDCSKTRPSPSPSSTSILAPLDADPSLPPCDPSLPSYVPKTNYANPSPPPYDPKTNYLSPRPQFLLYKPNPRIQKLLNKKQEVGLRGCKRLEDSFIFESLSDTETPEDTQSEDSSSVELEGQNEEVEESEAALTETAQEEPNVSEPNPIDIRTSNGRALEAKGVSKSYSSFRLKPIFVLLLLLVGCLCIPITDSPFIISVIDSSVGEESSFTKLYEPAELAEFARTNFDGLTRNFRLWSANTVSYFSKMIPIVKETNELGFLRFGNFTDSQVDIVGGAYLVKENQQNLQWPMKELEVGIVQMKEQGNMVTEAYEKVEEASQVNPEFEEAKLTLQAEVIEPDNSELEQIQEEYHVASHTELEQASQGKTELEEANLPLQAEVAEPHNSEVQQTEEESSVAFHIDHEAQPHNSEGQQTEEESSVAFHIDHEAQPHNSEVQQTEEESSVAFHIDHEAQSIIAEKEQEVQVSQVSKIEPEKVPEAEKLQGENKLVSRAEVEVQQIEEESSVASHVGPEAQSIIAENEQEVQVPQVSEIKTEVPQAEKLHGENKLISHTEVESSGAVFEPESSESEAWTANSQSFKELYLSLKEKSSAVNVLGISLLILILTVAAAFIFLKQQKPPTPSPAAIPMDQLLAKKLAPIPTASVENTHQGLSSRNWPTEVDMVGESCPSEMSSFQRSTSYGKRGSKGASFTSEYSMGSPSYNQKGSKGASEAQSQERGLRKSNKRESLASSSEYSTGSPSYGSFTSYEKIHIKHGCGDEEVVTPVRRSSRIRNQVSSP* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 77 93 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 870 970 - -
Vvi3g0879 1005 Coils Coil 709 729 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 137 288 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 955 970 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 360 376 - -
Vvi3g0879 1005 PANTHER TRANSMEMBRANE PROTEIN 1 668 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 324 379 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 1 43 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 330 359 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 1 109 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 137 172 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 982 1005 - -
Vvi3g0879 1005 Coils Coil 344 364 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 231 245 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 895 943 - -
Vvi3g0879 1005 MobiDBLite consensus disorder prediction 267 281 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0879 - - vvi:104878843 1862.04