Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0877 ATGGATACTCTTAATGATTTACTCGCTGCATGTGACCTTGTTTCCCTTCATTGTACTCTAACAAATGAAACGGTCCAAATCACCAATGCAGAATGTTTACAGCACATAAAGCCTGGGGCATTTCTTGTGAATACAGGGAGCAGTCCGCTGCTAGATGATTGTGCTCTGAAGCAGCTGTGGATTGATGGCACCATTGCTGGCTGTGCTTTGGATGGTGTTGAAACGCCACCAAGATCCTGA 240 0.4542 MDTLNDLLAACDLVSLHCTLTNETVQITNAECLQHIKPGAFLVNTGSSPLLDDCALKQLWIDGTIAGCALDGVETPPRS* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0877 79 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 79 IPR036291 -
Vvi3g0877 79 PANTHER C-TERMINAL BINDING PROTEIN AN-RELATED 1 76 IPR045015 GO:0000226
Vvi3g0877 79 Gene3D - 1 77 - -
Vvi3g0877 79 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2 77 IPR006140 GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi3g0877 Vvi-Chr3 8630875 8631114 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0877 - - vvi:100243152 141.739