Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi3g0867 ATGAAACTGAGGGTGAGATCTCTGGAGTCGAAAGAGACTCTGAAAATCCAAGTTCCCGACCCATGTTCTCTTCAACACTTCATCCACCTTCTTTCTCTGGCCATTTCTTCTTCGTCTTCTTCTTCCTCTTCCATTATCTATCTTTCTCTCAATAGGAAGGACGAGCTTCAGGTTTCTTCATCTCTCGATACTCTCCAATCTCTCGGTGTTACTTCCGGTGATCTCATCTTCTACTCCTTCAATCCCACCGCCTTCTCTCGTCAAACCCATGCGCCCCCAATTCCGGAAACCCTAGTAAATGAAGGAACCCCAATTCCATCTCAAACCCTGGTTCCGTCTCAAGCACTTGGTCCAAATTCAGGAGAAACCCTAATTCAATCTCAAACCTTGGATCCAAATTCAGGAGAAGCCCAAACCCTACCTATGACGAAACGTGTCATGGAAGAAACCCCAATTCCGTCTGAAACCCTGGTTTCAAATTCCGAAAGAAAAGAGACCCTACTTGAATCTCAGACCCTAGCTCCTTTGGCACAAGCAAATCCTCACGAGCCTAAAGAATATGGGTCCCTGGTGTCAGATTCAAAGAAAAACGAAACCCAGGAATTTTCGGGTGCAACAAGCATGGATGTTGAGGGTGGTGTTGCTGCTGCTGATGAAGATGATGAGCCTATTGTGGTGAAGAAGTCGTTTTCAGAGCCTTGTTTTCTGAGGAAGGTATTGAGAGAGGAGGTCGGTGATGATGGTAATGAGCACAAGCTTTTGGTGATTGCAGTTCACGCAGTCATGCTAGAATCTGGTTTTGTTGGGTTTGATTCAGTTTCCGGAATGAGGGTTGATCGGTTTCATCTTTCGGAGGAATATCCATTCGCGGCTATCTCAATGTCACTATGGTATACTCTCCCTGAACTTCTTGATCATGGCTGTGATGATTCTCCTGCAATTCAATCTGTTGCTTTGAAGTTTCAACACTTGGGACAATTCATAAATATTTATGGGTCTTTATCTGGAAATAGATCCACTGTTCATTGGGTTAGCTTGGACGAGTATAGATTTGCCCCTACCTTAGATTTAATGTGGACGCATTCTGATTCGGCGGAAGAAAAAGACAGGGGCAGTAGTAATTCGTACCCTGAAAATGAAGTTTTTGAATTTTGGAAGATTGTGAAGGATGGGTTAGCATTGCCTTTGTTAACAGACCTTTGTGAGAAGGGTGGCTTGCTGCCACCGCCCTGCCTAATGCGACTTCCTACAGAGCTTAAACTTAAGATTTTGGAACTACTACCTGGTGTTGATCTTGGGAAGGTGGGGTGTGTCTGTTCTGAGCTTATGTATTTGTCTTCAAACAATGATTTGTGGAAGCAGAAGTTTACTGAGGAGTTTGGAAATGTGCGGGTAGGGCAGGGTTTTAGCCTTTGGAAAGATAAGTTTGCGACTTGGTGGGAGAATAGGAAGAAGAGGAAGAGGGTGAGTGGCATGTGCACATGGTTTCCCAGTCTTGAGGCACCTTCTTATTTCCCAATAAGAAGGGACCCTAATCCATTTGCTATACCCCCAACTATAGGCGGAGATTATGACCACTTTCCGGCACTTGGCATACCCTCTCCCTTTGGACAGCCTGGGCGAAGATATCATCGATTTCTAGCACCGCGTAATACCATACCTCGATGTAATCTTGGAGGATTTATTGGCTAA 1692 0.4486 MKLRVRSLESKETLKIQVPDPCSLQHFIHLLSLAISSSSSSSSSIIYLSLNRKDELQVSSSLDTLQSLGVTSGDLIFYSFNPTAFSRQTHAPPIPETLVNEGTPIPSQTLVPSQALGPNSGETLIQSQTLDPNSGEAQTLPMTKRVMEETPIPSETLVSNSERKETLLESQTLAPLAQANPHEPKEYGSLVSDSKKNETQEFSGATSMDVEGGVAAADEDDEPIVVKKSFSEPCFLRKVLREEVGDDGNEHKLLVIAVHAVMLESGFVGFDSVSGMRVDRFHLSEEYPFAAISMSLWYTLPELLDHGCDDSPAIQSVALKFQHLGQFINIYGSLSGNRSTVHWVSLDEYRFAPTLDLMWTHSDSAEEKDRGSSNSYPENEVFEFWKIVKDGLALPLLTDLCEKGGLLPPPCLMRLPTELKLKILELLPGVDLGKVGCVCSELMYLSSNNDLWKQKFTEEFGNVRVGQGFSLWKDKFATWWENRKKRKRVSGMCTWFPSLEAPSYFPIRRDPNPFAIPPTIGGDYDHFPALGIPSPFGQPGRRYHRFLAPRNTIPRCNLGGFIG* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi3g0867 563 MobiDBLite consensus disorder prediction 172 208 - -
Vvi3g0867 563 Gene3D - 231 411 - -
Vvi3g0867 563 Gene3D - 412 490 - -
Vvi3g0867 563 SUPERFAMILY F-box domain 405 473 IPR036047 GO:0005515
Vvi3g0867 563 PANTHER F-BOX PROTEIN SKIP22 1 561 - -
Vvi3g0867 563 SMART fbox_2 415 455 IPR001810 GO:0005515
Vvi3g0867 563 CDD F-box_AtSKIP22-like 411 456 - -
Vvi3g0867 563 ProSiteProfiles F-box domain profile. 409 455 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi3g0867 K10293 - vvi:100246319 1124.38